RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 TFF3Q07654 80 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 HERPUD1Q15011 391 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 PDCD1Q15116 288 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 TSC22D1Q15714 1073 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 AWAT1Q58HT5 328 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 H1FOOQ8IZA3 346 aaPredicted RBP6.89□□□□□ -1.31
SORT1-205ENST00000483508 FAM58AQ8N1B3 248 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 ZNF561Q8N587 486 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 SUMF2Q8NBJ7 301 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 OR1K1Q8NGR3 316 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 OR2G3Q8NGZ4 309 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 OR10J5Q8NHC4 309 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 LILRB1Q8NHL6 650 aaPredicted RBP6.89□□□□□ -1.31
SORT1-205ENST00000483508 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 NRGNQ92686 78 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 NINJ1Q92982 152 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 LSM10Q969L4 123 aaKnown RBP6.89□□□□□ -1.31
SORT1-205ENST00000483508 RBMXL1Q96E39 390 aaKnown RBP6.89□□□□□ -1.31
SORT1-205ENST00000483508 MALSU1Q96EH3 234 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 RAB40CQ96S21 281 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 ZDHHC11Q9H8X9 412 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 RPS10P5Q9NQ39 176 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 KIAA1456Q9P272 454 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 OR2W1Q9Y3N9 320 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 LIPGQ9Y5X9 500 aa6.89□□□□□ -1.31
SORT1-205ENST00000483508 A0A096LPE4 126 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 IGKV1D-13A0A0B4J2D9 117 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 A0A0G2JNJ9 132 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 A0A1W2PPZ6 126 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 ZNF98A6NK75 572 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 M0R036 132 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 HSD17B6O14756 317 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 SSSCA1O60232 199 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 PGLYRP1O75594 196 aaPredicted RBP6.88□□□□□ -1.31
SORT1-205ENST00000483508 IGHG3P01860 377 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 S100A8P05109 93 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 IGKV1-13P0DP09 117 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 ZNF44P15621 663 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 F2RP25116 425 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 POLR2GP62487 172 aaKnown RBP eCLIP6.88□□□□□ -1.31
SORT1-205ENST00000483508 TBC1D28Q2M2D7 210 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 CLEC9AQ6UXN8 241 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 NUFIP2Q7Z417 695 aaKnown RBP6.88□□□□□ -1.31
SORT1-205ENST00000483508 STX12Q86Y82 276 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 PLPPR1Q8TBJ4 325 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 HIST1H2BAQ96A08 127 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 ATP5SQ99766 215 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 FOXC2Q99958 501 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 RTL8AQ9BWD3 113 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 SH3BGRL3Q9H299 93 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 CCL28Q9NRJ3 127 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 COA4Q9NYJ1 87 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 Q9UFV3 132 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 RNF150Q9ULK6 438 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 POLDIP2Q9Y2S7 368 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 ABCA12Q86UK0 2595 aa6.88□□□□□ -1.31
SORT1-205ENST00000483508 INTS1Q8N201 2190 aaKnown RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 TRAV24A0A0B4J272 114 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 IGKV1-6A0A0C4DH72 117 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 RBFOX3A6NFN3 312 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 RNF212BA8MTL3 300 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 SYNGR1O43759 233 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 CNOT4O95628 575 aaKnown RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 NGFP01138 241 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 IFNA5P01569 189 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 SNRNP70P08621 437 aaKnown RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 CELA3AP09093 270 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 OR8U8P0C7N1 319 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 HOXB1P14653 301 aaPredicted RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 SELEP16581 610 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 BMP5P22003 454 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 PPP1CCP36873 323 aaKnown RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 RPL35P42766 123 aaKnown RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 DYNLT3P51808 116 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 AKR1D1P51857 326 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 TAS2R30P59541 319 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 HABP2Q14520 560 aaPredicted RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 GABRA6Q16445 453 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 KRTAP21-3Q3LHN1 58 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 ACSF3Q4G176 576 aaPredicted RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 HIKESHIQ53FT3 197 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 SOHLH1Q5JUK2 328 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 ZNF506Q5JVG8 444 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 AKR1C8PQ5T2L2 129 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 C9orf135Q5VTT2 229 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 FBXW9Q5XUX1 488 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 TGIF2LYQ8IUE0 185 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 OR10V1Q8NGI7 309 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 OR5C1Q8NGR4 320 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 SFT2D1Q8WV19 159 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 BCL2L2Q92843 193 aaPredicted RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 CLCC1Q96S66 551 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 TCEAL7Q9BRU2 100 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 PARD6GQ9BYG4 376 aaPredicted RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 OR51I2Q9H344 312 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 LIN7CQ9NUP9 197 aaKnown RBP6.87□□□□□ -1.31
SORT1-205ENST00000483508 CRIM1Q9NZV1 1036 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 FAM215AQ9Y5M1 114 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 F8P00451 2351 aa6.87□□□□□ -1.31
SORT1-205ENST00000483508 DOCK7Q96N67 2140 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms