RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 FAM201AQ5SY85 155 aa11.03□□□□□ -0.64
CPNE1-225ENST00000483495 ZNRF1Q8ND25 227 aa11.03□□□□□ -0.64
CPNE1-225ENST00000483495 LSM10Q969L4 123 aaKnown RBP11.03□□□□□ -0.64
CPNE1-225ENST00000483495 DCTN5Q9BTE1 182 aa11.03□□□□□ -0.64
CPNE1-225ENST00000483495 PRORYQ9H606 182 aa11.03□□□□□ -0.64
CPNE1-225ENST00000483495 PLEKHF2Q9H8W4 249 aa11.03□□□□□ -0.64
CPNE1-225ENST00000483495 OR2S2Q9NQN1 319 aa11.03□□□□□ -0.64
CPNE1-225ENST00000483495 A0A1B0GU03 582 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 MFSD2BA6NFX1 497 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 CCL21O00585 134 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 GPR137BO60478 399 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 CYB5R3P00387 301 aaPredicted RBP11.02□□□□□ -0.64
CPNE1-225ENST00000483495 CGB3P0DN86 165 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 CGB7P0DN87 165 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 PPP1CCP36873 323 aaKnown RBP11.02□□□□□ -0.64
CPNE1-225ENST00000483495 AANATQ16613 207 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 FAM53AQ6NSI3 398 aaPredicted RBP11.02□□□□□ -0.64
CPNE1-225ENST00000483495 GALNT11Q8NCW6 608 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 RNASE6Q93091 150 aaKnown RBP11.02□□□□□ -0.64
CPNE1-225ENST00000483495 C5orf30Q96GV9 206 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 FAM234AQ9H0X4 552 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 OR2D2Q9H210 308 aa11.02□□□□□ -0.64
CPNE1-225ENST00000483495 BARX1Q9HBU1 254 aaPredicted RBP11.02□□□□□ -0.64
CPNE1-225ENST00000483495 POLEQ07864 2286 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 F2RL2O00254 374 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 SFTPCP11686 197 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 MMP9P14780 707 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 TMEM33P57088 247 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 UNQ6494/PRO21346Q6UXR6 183 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 LRRC20Q8TCA0 184 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 GPR146Q96CH1 333 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 C14orf79Q96F83 325 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 AGMATQ9BSE5 352 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 ZC4H2Q9NQZ6 224 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-225ENST00000483495 SDHAF2Q9NX18 166 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 OR6C3Q9NZP0 311 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 FBXL17Q9UF56 701 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 PFDN2Q9UHV9 154 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 JPT1Q9UK76 154 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 PLCE1Q9P212 2302 aa11.02□□□□□ -0.65
CPNE1-225ENST00000483495 A0A0G2JRQ6 117 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 E7EQL1 145 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 FGF16O43320 207 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 JTBO76095 146 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 IRF2P14316 349 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 ID4P47928 161 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 CCL8P80075 99 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 TLE1Q04724 770 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 CXorf66Q5JRM2 361 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-225ENST00000483495 TOR2AQ5JU69 321 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 RPL7L1Q6DKI1 246 aaKnown RBP11.01□□□□□ -0.65
CPNE1-225ENST00000483495 ZNF788Q6ZQV5 615 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 CCDC28AQ8IWP9 274 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 RFESDQ8TAC1 157 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 ZCCHC14Q8WYQ9 949 aaKnown RBP11.01□□□□□ -0.65
CPNE1-225ENST00000483495 PLPPR2Q96GM1 343 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 GAFA1Q96PS6 74 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 SESN1Q9Y6P5 492 aa11.01□□□□□ -0.65
CPNE1-225ENST00000483495 I3L521 148 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 YPEL1O60688 119 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 IGKV1-5P01602 117 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 POLR2GP62487 172 aaKnown RBP eCLIP11□□□□□ -0.65
CPNE1-225ENST00000483495 EIF4E3Q8N5X7 224 aaKnown RBP11□□□□□ -0.65
CPNE1-225ENST00000483495 TCTEX1D1Q8N7M0 179 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 UBAC2Q8NBM4 344 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 EDARADDQ8WWZ3 215 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 YPEL2Q96QA6 119 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 EGLN1Q9GZT9 426 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 ZNF665Q9H7R5 613 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 RNF150Q9ULK6 438 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 RNF115Q9Y4L5 304 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 LRRC30A6NM36 301 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 KIAA1324LA8MWY0 1029 aaPredicted RBP11□□□□□ -0.65
CPNE1-225ENST00000483495 SIGLEC5O15389 551 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 SELLP14151 372 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 PVALBP20472 110 aaPredicted RBP11□□□□□ -0.65
CPNE1-225ENST00000483495 LOXL3P58215 753 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 ADORA2A-AS1P86434 159 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 EFNB3Q15768 340 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 MORN2Q502X0 79 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 ZNF66Q6ZN08 573 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 HSD17B13Q7Z5P4 300 aaPredicted RBP11□□□□□ -0.65
CPNE1-225ENST00000483495 TGIF2LYQ8IUE0 185 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 OR2C3Q8N628 320 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 TMED6Q8WW62 240 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 ARV1Q9H2C2 271 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 RAB9BQ9NP90 201 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 COQ3Q9NZJ6 369 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 NDRG3Q9UGV2 375 aa11□□□□□ -0.65
CPNE1-225ENST00000483495 KIAA2026Q5HYC2 2103 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 IGHV3-43A0A0B4J1X8 118 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-225ENST00000483495 FAM90A27PA6NNH2 459 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 ITGB1BP1O14713 200 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 SHOXO15266 292 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 CD3EP07766 207 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 FAM157CP0CG43 387 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 IGHV3-43DP0DP04 118 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 EDDM3BP56851 147 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms