RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 CCDC59Q9P031 241 aaKnown RBP10.16□□□□□ -0.78
COL21A1-209ENST00000482933 GHRLQ9UBU3 117 aa10.16□□□□□ -0.78
COL21A1-209ENST00000482933 PEX16Q9Y5Y5 336 aa10.16□□□□□ -0.78
COL21A1-209ENST00000482933 IGHV1-3A0A0C4DH29 117 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 PSMB11A5LHX3 300 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 CA11O75493 328 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 CRTAPO75718 401 aaPredicted RBP10.15□□□□□ -0.79
COL21A1-209ENST00000482933 GLAP06280 429 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 MGMTP16455 207 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 FGF9P31371 208 aaPredicted RBP10.15□□□□□ -0.79
COL21A1-209ENST00000482933 LOXL3P58215 753 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 NCS1P62166 190 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 EBI3Q14213 229 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 HNF4GQ14541 408 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 TCTEX1D4Q5JR98 221 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 KHDC1LQ5JSQ8 128 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 RAB12Q6IQ22 244 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 MOB3BQ86TA1 216 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 MS4A15Q8N5U1 240 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 CHPT1Q8WUD6 406 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 AP3S1Q92572 193 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 FANCD2OSQ96PS1 177 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 CHCHD6Q9BRQ6 235 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 KRTAP9-9Q9BYP9 154 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 KRTAP9-4Q9BYQ2 154 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 SELENOIQ9C0D9 397 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 OR51E2Q9H255 320 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 NECAP2Q9NVZ3 263 aa10.15□□□□□ -0.79
COL21A1-209ENST00000482933 IGHV3-43A0A0B4J1X8 118 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 LOC100506127A0A0U1RQW1 187 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 TRDV1A0A1B0GX56 115 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 C12orf77C9JDV5 145 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 PIN1P1O15428 100 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 TXNL1O43396 289 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 IGHV3-43DP0DP04 118 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 FUT3P21217 361 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 LSM3P62310 102 aaKnown RBP10.14□□□□□ -0.79
COL21A1-209ENST00000482933 LIPKQ5VXJ0 399 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 GLT8D1Q68CQ7 371 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 CD200R1LQ6Q8B3 271 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 LYPD6Q86Y78 171 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 IZUMO1Q8IYV9 350 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 GAPTQ8N292 157 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 MINDY2Q8NBR6 621 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 OR2T10Q8NGZ9 312 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 OR4K15Q8NH41 348 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 MCFD2Q8NI22 146 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 UBALD1Q8TB05 177 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 CST11Q9H112 138 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 BANF2Q9H503 90 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 GNG12Q9UBI6 72 aa10.14□□□□□ -0.79
COL21A1-209ENST00000482933 SERPINE3A8MV23 424 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 SC5DO75845 299 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 UBBP0CG47 229 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 CD1BP29016 333 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 CD40LGP29965 261 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 REG1BP48304 166 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 SLC35B1P78383 322 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 ZNF45Q02386 682 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 ACSM3Q53FZ2 586 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 STEAP3Q658P3 488 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 ZNF554Q86TJ5 538 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 FOXRED2Q8IWF2 684 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 PRR18Q8N4B5 295 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 OR51D1Q8NGF3 324 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 RTN4IP1Q8WWV3 396 aaPredicted RBP10.13□□□□□ -0.79
COL21A1-209ENST00000482933 PHF21AQ96BD5 680 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 PPP1R14BQ96C90 147 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 EAF1Q96JC9 268 aaPredicted RBP10.13□□□□□ -0.79
COL21A1-209ENST00000482933 Q96M66 194 aa10.13□□□□□ -0.79
COL21A1-209ENST00000482933 NXF2Q9GZY0 626 aaKnown RBP10.13□□□□□ -0.79
COL21A1-209ENST00000482933 IGHV3-72A0A0B4J1Y9 119 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 NCBP2LA6PVI3 153 aaKnown RBP10.12□□□□□ -0.79
COL21A1-209ENST00000482933 PDCD6O75340 191 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 DUS4LO95620 317 aaKnown RBP10.12□□□□□ -0.79
COL21A1-209ENST00000482933 IGHG2P01859 326 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 HBZP02008 142 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 RORCP51449 518 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 UNQ9370/PRO34162Q6UXP9 181 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 SLC25A48Q6ZT89 311 aaKnown RBP10.12□□□□□ -0.79
COL21A1-209ENST00000482933 SLC35E3Q7Z769 313 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 ZNF329Q86UD4 541 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 TGIF2LXQ8IUE1 241 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 COMMD1Q8N668 190 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 TMEM104Q8NE00 496 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 MRAPQ8TCY5 172 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 ST6GALNAC6Q969X2 333 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 KCTD7Q96MP8 289 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 CENPOQ9BU64 300 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 SLIRPQ9GZT3 109 aaKnown RBP10.12□□□□□ -0.79
COL21A1-209ENST00000482933 ZFP57Q9NU63 452 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 LIN7CQ9NUP9 197 aaKnown RBP10.12□□□□□ -0.79
COL21A1-209ENST00000482933 TXNL4BQ9NX01 149 aaKnown RBP10.12□□□□□ -0.79
COL21A1-209ENST00000482933 KCNIP1Q9NZI2 227 aa10.12□□□□□ -0.79
COL21A1-209ENST00000482933 A0A075B6Q4 140 aa10.11□□□□□ -0.79
COL21A1-209ENST00000482933 UBE2QL1A1L167 161 aa10.11□□□□□ -0.79
COL21A1-209ENST00000482933 MOSP00540 346 aa10.11□□□□□ -0.79
COL21A1-209ENST00000482933 PRB2P02812 416 aaPredicted RBP10.11□□□□□ -0.79
COL21A1-209ENST00000482933 IGLL1P15814 213 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms