RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ZNF845Q96IR2 970 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-207ENST00000482722 LOC102725191A0A1B0GVB3 256 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 HRASP01112 189 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF32P17041 273 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 OTX1P32242 354 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-207ENST00000482722 NTF4P34130 210 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 MPLP40238 635 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 DSCR4P56555 118 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-207ENST00000482722 CALHM1Q8IU99 346 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 SPSB1Q96BD6 273 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 PROK2Q9HC23 129 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 NAGKQ9UJ70 344 aa12.2□□□□□ -0.46
COL9A2-207ENST00000482722 IGKV1D-13A0A0B4J2D9 117 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 A0A1B0GUS0 222 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 MAP1LC3B2A6NCE7 125 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF737O75373 536 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 TRAPPC6AO75865 159 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 SCTP09683 121 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 IGKV1-13P0DP09 117 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 TCN2P20062 427 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 Q6ZSR3 168 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 TIPARPQ7Z3E1 657 aaKnown RBP12.19□□□□□ -0.46
COL9A2-207ENST00000482722 RPS19BP1Q86WX3 136 aaKnown RBP12.19□□□□□ -0.46
COL9A2-207ENST00000482722 MAP1LC3BQ9GZQ8 125 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 NCKAP5O14513 1909 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-207ENST00000482722 KBTBD11O94819 623 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 CER1O95813 267 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 MDH2P40926 338 aaKnown RBP12.19□□□□□ -0.46
COL9A2-207ENST00000482722 CENPVQ7Z7K6 275 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-207ENST00000482722 PLA2G3Q9NZ20 509 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 OR6C3Q9NZP0 311 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 MRPS18CQ9Y3D5 142 aaKnown RBP12.19□□□□□ -0.46
COL9A2-207ENST00000482722 CUL9Q8IWT3 2517 aa12.19□□□□□ -0.46
COL9A2-207ENST00000482722 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 C3orf80F5H4A9 247 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 PDCD6O75340 191 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 VAMP5O95183 116 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 COX6A1P12074 109 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 IRF2P14316 349 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 GAGE1Q13065 139 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 ACOT6Q3I5F7 207 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF573Q86YE8 665 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 C10orf35Q96D05 121 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 AGMATQ9BSE5 352 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 OPN3Q9H1Y3 402 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 PLK3Q9H4B4 646 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF292O60281 2723 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF705FA8MVS1 300 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 M0R296 226 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 CXCL13O43927 109 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 IFNA1P01562 189 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF705DP0CH99 300 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF705BP0CI00 300 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 CCNOP22674 350 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 UCP1P25874 307 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 FKBP2P26885 142 aaKnown RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 MRPS11P82912 194 aaKnown RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 ARL16Q0P5N6 197 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 CNN3Q15417 329 aaKnown RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 C9orf135Q5VTT2 229 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 PLCXD3Q63HM9 321 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 MYPOPQ86VE0 399 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-207ENST00000482722 TMEM256Q8N2U0 113 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 OR2T10Q8NGZ9 312 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 DIRC2Q96SL1 478 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 OR51I2Q9H344 312 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 CCL28Q9NRJ3 127 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
COL9A2-207ENST00000482722 HPRT1P00492 218 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 CNN1P51911 297 aaKnown RBP12.17□□□□□ -0.46
COL9A2-207ENST00000482722 MEF2BQ02080 365 aaPredicted RBP12.17□□□□□ -0.46
COL9A2-207ENST00000482722 ARSJQ5FYB0 599 aaPredicted RBP12.17□□□□□ -0.46
COL9A2-207ENST00000482722 FAM27BQ5VT28 67 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 FGFBP3Q8TAT2 258 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 M0QZK8 103 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 NUPR1O60356 82 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 GGCTO75223 188 aaKnown RBP12.17□□□□□ -0.46
COL9A2-207ENST00000482722 OR10J1P30954 320 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 ZNF92Q03936 586 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 OR8B8Q15620 311 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 TMEM211Q6ICI0 200 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 ASCL4Q6XD76 172 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 AAED1Q7RTV5 226 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 PRR18Q8N4B5 295 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 TBX15Q96SF7 602 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 IL36RNQ9UBH0 155 aa12.17□□□□□ -0.46
COL9A2-207ENST00000482722 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 CD33P20138 364 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 CARD18P57730 90 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 RAC1P63000 192 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 IL11RAQ14626 422 aa12.16□□□□□ -0.46
COL9A2-207ENST00000482722 DAZAP2Q15038 168 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-207ENST00000482722 TESK1Q15569 626 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms