RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 TREX1Q9NSU2 369 aa2.26□□□□□ -2.05
GTF3A-207ENST00000482655 ZMAT5Q9UDW3 170 aaKnown RBP2.26□□□□□ -2.05
GTF3A-207ENST00000482655 C3orf18Q9UK00 162 aa2.26□□□□□ -2.05
GTF3A-207ENST00000482655 ARL2BPQ9Y2Y0 163 aa2.26□□□□□ -2.05
GTF3A-207ENST00000482655 SNX24Q9Y343 169 aa2.26□□□□□ -2.05
GTF3A-207ENST00000482655 UTP11Q9Y3A2 253 aaKnown RBP2.26□□□□□ -2.05
GTF3A-207ENST00000482655 HIVEP2P31629 2446 aa2.26□□□□□ -2.05
GTF3A-207ENST00000482655 RYR2Q92736 4967 aa2.26□□□□□ -2.05
GTF3A-207ENST00000482655 DSCAMO60469 2012 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 MAP1AP78559 2803 aaPredicted RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 TLN2Q9Y4G6 2542 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 DNAJC13O75165 2243 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 A0A0J9YY10 115 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 LOC285095A0A1B0GVY8 99 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 C2orf74A8MZ97 194 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 KRBOX1C9JBD0 128 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 KCNK1O00180 336 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 CCL22O00626 93 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 GLSO94925 669 aaPredicted RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 PAHP00439 452 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 HLA-DQA1P01909 254 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 ADRA2AP08913 450 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 IGFBP3P17936 291 aaPredicted RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 IL1RNP18510 177 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 CCNOP22674 350 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 CRABP2P29373 138 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 OPRM1P35372 400 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 APLNRP35414 380 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 MAGEA12P43365 314 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 SLCO1A2P46721 670 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 PRLHRP49683 370 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 EMP2P54851 167 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 PLTPP55058 493 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 RWDD2BP57060 319 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 PAFAH1B2P68402 229 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 DEFA6Q01524 100 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 RPL18AQ02543 176 aaKnown RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 PAFAH1B3Q15102 231 aaKnown RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 ACSBG2Q5FVE4 666 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 C6orf183Q5T699 404 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 CPTPQ5TA50 214 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 PDPK2PQ6A1A2 396 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 FAM151BQ6UXP7 276 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 BHLHA15Q7RTS1 189 aaPredicted RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 SLC16A13Q7RTY0 426 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 LGI3Q8N145 548 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 TMEM256Q8N2U0 113 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 LCN9Q8WX39 176 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 BAALCQ8WXS3 180 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 TFGQ92734 400 aaPredicted RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 CDS1Q92903 461 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 TSLPQ969D9 159 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 IMP4Q96G21 291 aaKnown RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 RDH12Q96NR8 316 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 TSNAXQ99598 290 aaKnown RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 KCNS3Q9BQ31 491 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 FAM96AQ9H5X1 160 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 ZNF430Q9H8G1 570 aaPredicted RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 PROK2Q9HC23 129 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 FGFR1OP2Q9NVK5 253 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 RBM22Q9NW64 420 aaKnown RBP eCLIP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 RHBDL2Q9NX52 303 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 TAS2R1Q9NYW7 299 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 STX18Q9P2W9 335 aaKnown RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 CFL2Q9Y281 166 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
GTF3A-207ENST00000482655 OR51B2Q9Y5P1 312 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 USH1CQ9Y6N9 552 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 ABCA1O95477 2261 aa2.25□□□□□ -2.05
GTF3A-207ENST00000482655 HYDINQ4G0P3 5121 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 SCN3AQ9NY46 2000 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 IGKV2-28A0A075B6P5 120 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 hCG_1818297A0A087WSY0 165 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 SLC5A10A0PJK1 596 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 SEC14L6B5MCN3 397 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 BOLA2-SMG1P6H3BVE0 249 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 MANBAO00462 879 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 CTNSO60931 367 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 GATBO75879 557 aaKnown RBP2.24□□□□□ -2.05
GTF3A-207ENST00000482655 IGKV2D-28P01615 120 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 IGHV3-11P01762 117 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 MRPL3P09001 348 aaKnown RBP2.24□□□□□ -2.05
GTF3A-207ENST00000482655 SLC35G6P0C7Q6 338 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 NPY1RP25929 384 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 MLF1P58340 268 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 TAS2R31P59538 309 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 SLC35A1P78382 337 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 OR1Q1Q15612 314 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 VAMP3Q15836 100 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 SLC25A35Q3KQZ1 300 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 YIF1BQ5BJH7 314 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 C6orf52Q5T4I8 152 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 PPP1R2P3Q6NXS1 205 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 Q6ZR03 302 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 NTM-AS1Q6ZSK4 140 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 VN1R4Q7Z5H5 301 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 WDR86Q86TI4 376 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 TMEM251Q8N6I4 163 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 UBL4BQ8N7F7 174 aa2.24□□□□□ -2.05
GTF3A-207ENST00000482655 OR13C4Q8NGS5 318 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms