RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 POLR3HQ9Y535 204 aaPredicted RBP2.45□□□□□ -2.02
SF3B1-210ENST00000482158 CAMSAP1Q5T5Y3 1602 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 RAB3GAP2Q9H2M9 1393 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 DOCK6Q96HP0 2047 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 ZFYVE9O95405 1425 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 GNG14A0A1W2PPG7 69 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 OR5H14A6NHG9 310 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 UBDO15205 165 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 TNNC2P02585 160 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 TCRBP04435 133 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 CRABP2P29373 138 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 FUSP35637 526 aaKnown RBP eCLIP2.44□□□□□ -2.02
SF3B1-210ENST00000482158 CD79BP40259 229 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 CCL7P80098 99 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 ZNHIT3Q15649 155 aaPredicted RBP2.44□□□□□ -2.02
SF3B1-210ENST00000482158 GUK1Q16774 197 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 BSXQ3C1V8 233 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 CCDC153Q494R4 210 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 ZCWPW2Q504Y3 356 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 SMIM15Q7Z3B0 74 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 LYZL2Q7Z4W2 148 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 FAM19A3Q7Z5A8 133 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 C10orf107Q8IVU9 208 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 OR5B17Q8NGF7 314 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 RNASEH2CQ8TDP1 164 aaKnown RBP2.44□□□□□ -2.02
SF3B1-210ENST00000482158 DGCR14Q96DF8 476 aaKnown RBP2.44□□□□□ -2.02
SF3B1-210ENST00000482158 CCDC42Q96M95 316 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 TRIM4Q9C037 500 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 SLC22A4Q9H015 551 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 ASCL3Q9NQ33 180 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 PAIP2BQ9ULR5 123 aaKnown RBP2.44□□□□□ -2.02
SF3B1-210ENST00000482158 POMPQ9Y244 141 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 ERGIC3Q9Y282 383 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 ZNF337Q9Y3M9 751 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 EIF3AQ14152 1382 aaKnown RBP2.44□□□□□ -2.02
SF3B1-210ENST00000482158 LCTP09848 1927 aa2.44□□□□□ -2.02
SF3B1-210ENST00000482158 SHANK3Q9BYB0 1731 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 C2orf74A8MZ97 194 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 C8orf87E5RJ46 101 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 SLC31A1O15431 190 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 SOX14O95416 240 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 DHFRP00374 187 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 NQO1P15559 274 aaKnown RBP2.43□□□□□ -2.02
SF3B1-210ENST00000482158 GZMMP51124 257 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 RAP1GDS1P52306 607 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 RHOAP61586 193 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 TIMM23BQ5SRD1 257 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 SYPL2Q5VXT5 272 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 C3orf33Q6P1S2 294 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 DGAT2L6Q6ZPD8 337 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 OR2V1Q8NHB1 315 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 NEK7Q8TDX7 302 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 AP3S1Q92572 193 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 PTH2Q96A98 100 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 PGLYRP3Q96LB9 341 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 FAM107BQ9H098 131 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 METTL9Q9H1A3 318 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 FBXL15Q9H469 300 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 BATF3Q9NR55 127 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 BABAM2Q9NXR7 383 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 GINS2Q9Y248 185 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 MYO16Q9Y6X6 1858 aa2.43□□□□□ -2.02
SF3B1-210ENST00000482158 CACNA1SQ13698 1873 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 PCF11O94913 1555 aaKnown RBP2.42□□□□□ -2.02
SF3B1-210ENST00000482158 H0Y980 276 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 I3L4J1 428 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 M0R036 132 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 SULT1C2O00338 296 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 ACOX3O15254 700 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 ATP8B1O43520 1251 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 PSCAO43653 123 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 NDUFA2O43678 99 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 STX10O60499 249 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 CDS2O95674 445 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 GPR75O95800 540 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 APOEP02649 317 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 OPN1SWP03999 348 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 SPNP16150 400 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 S100A1P23297 94 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 SERPINB1P30740 379 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 PSME3P61289 254 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 AESQ08117 197 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 MMDQ15546 238 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 TAF1AQ15573 450 aaPredicted RBP2.42□□□□□ -2.02
SF3B1-210ENST00000482158 AKIRIN2Q53H80 203 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 FAM162BQ5T6X4 162 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 SDHAF4Q5VUM1 108 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 CCDC121Q6ZUS5 278 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 SSX7Q7RTT5 188 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 S100A7AQ86SG5 101 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 RIBC1Q8N443 379 aaPredicted RBP2.42□□□□□ -2.02
SF3B1-210ENST00000482158 TMEM251Q8N6I4 163 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 ACBD4Q8NC06 268 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 OR2D3Q8NGH3 330 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 OR4A5Q8NH83 315 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 OR5AK3PQ8NH89 298 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 FAM45AQ8TCE6 357 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 DYNC2LI1Q8TCX1 351 aa2.42□□□□□ -2.02
SF3B1-210ENST00000482158 CASTOR1Q8WTX7 329 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms