RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 IZUMO4Q1ZYL8 232 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 LRRC75BQ2VPJ9 315 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 RBMS3Q6XE24 437 aaKnown RBP12.99□□□□□ -0.33
C9orf3-218ENST00000482056 TMEM178AQ8NBL3 297 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 MBD3L1Q8WWY6 194 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 RSG1Q9BU20 258 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 OR2J1Q9GZK6 312 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 AHCTF1Q8WYP5 2266 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 TMEM30CPA0ZSE6 113 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 FBP1P09467 338 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 BCL2P10415 239 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 ARG2P78540 354 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 MSMO1Q15800 293 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF585BQ52M93 769 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF766Q5HY98 468 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 SLC16A13Q7RTY0 426 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 WDR86Q86TI4 376 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 DRAM1Q8N682 238 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 TMPRSS5Q9H3S3 457 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 RPRMQ9NS64 109 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 MMP24Q9Y5R2 645 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF727A8MUV8 499 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 IQCF6A8MYZ5 107 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 CDIPTO14735 213 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 TNFSF15O95150 251 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 CD59P13987 128 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 GLIPR1P48060 266 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 RAB11AP62491 216 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF674Q2M3X9 581 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 TMEM41BQ5BJD5 291 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 P2RX4Q99571 388 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 SPRR3Q9UBC9 169 aa12.98□□□□□ -0.33
C9orf3-218ENST00000482056 ZFP92A6NM28 416 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 HAND1O96004 215 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 IDH3GP51553 393 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-218ENST00000482056 SPANXN5Q5MJ07 72 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF645Q8N7E2 425 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 GALMQ96C23 342 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 LOXL4Q96JB6 756 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 ZDBF2Q9HCK1 2354 aa12.97□□□□□ -0.33
C9orf3-218ENST00000482056 MED12LQ86YW9 2145 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 PPIHO43447 177 aaKnown RBP12.96□□□□□ -0.33
C9orf3-218ENST00000482056 SLC38A11Q08AI6 406 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 CATR1Q13166 79 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 ELOBQ15370 118 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 INO80CQ6PI98 192 aaPredicted RBP12.96□□□□□ -0.33
C9orf3-218ENST00000482056 LCN15Q6UWW0 184 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 VASH2Q86V25 355 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 FGFRL1Q8N441 504 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 SLC25A40Q8TBP6 338 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 Q8WTZ3 238 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 WDR61Q9GZS3 305 aaKnown RBP12.96□□□□□ -0.33
C9orf3-218ENST00000482056 NIT2Q9NQR4 276 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 TIMM9Q9Y5J7 89 aa12.96□□□□□ -0.33
C9orf3-218ENST00000482056 GRPP07492 148 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 CELA3BP08861 270 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 IL2RGP31785 369 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 ARL16Q0P5N6 197 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 MRGPRGQ86SM5 289 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF610Q8N9Z0 462 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 UBALD1Q8TB05 177 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 NINJ1Q92982 152 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 RCC1LQ96I51 464 aaKnown RBP12.96□□□□□ -0.34
C9orf3-218ENST00000482056 ZDHHC11Q9H8X9 412 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 VAX2Q9UIW0 290 aa12.96□□□□□ -0.34
C9orf3-218ENST00000482056 MED13Q9UHV7 2174 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 DOCK7Q96N67 2140 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 TGOLN2O43493 480 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 CLN5O75503 358 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 CLDN1O95832 211 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 FABP1P07148 127 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 SP9P0CG40 484 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 TNFRSF9Q07011 255 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 IGFBP7Q16270 282 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 ATP6V1FQ16864 119 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 TAF15Q92804 592 aaKnown RBP eCLIP12.95□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF665Q9H7R5 613 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 OBP2BQ9NPH6 170 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 FRYLO94915 3013 aa12.95□□□□□ -0.34
C9orf3-218ENST00000482056 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 IGHV1-2P23083 117 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 HOXC12P31275 282 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 SLC35E4Q6ICL7 350 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 HAPLN4Q86UW8 402 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 MYPOPQ86VE0 399 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-218ENST00000482056 OR13D1Q8NGV5 346 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 OR4C12Q96R67 309 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 RBKSQ9H477 322 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 TMEM242Q9NWH2 141 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 R4GN57 208 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 VPS13AQ96RL7 3174 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 HOXA5P20719 270 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 S100PP25815 95 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 ERVS71-1P61550 626 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 PSG7Q13046 419 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms