RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 HMGN3Q15651 99 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 MOB1BQ7L9L4 216 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 Q8N9W7 124 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 OR2AK2Q8NG84 335 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 OR51D1Q8NGF3 324 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 S1PR3Q99500 378 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 ABCG5Q9H222 651 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 V9GY05 133 aa13.95□□□□□ -0.18
COL9A3-212ENST00000481800 A0A0A6YYD4 124 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 AP4M1O00189 453 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 PDCD5O14737 125 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 SOCS1O15524 211 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 ATP6V1G2O95670 118 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 NAPSAO96009 420 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 GPR12P47775 334 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 CLDN12P56749 244 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 LY6G6FQ5SQ64 297 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 KPRPQ5T749 579 aaPredicted RBP13.94□□□□□ -0.18
COL9A3-212ENST00000481800 STPG2Q8N412 459 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 SVOPQ8N4V2 548 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 COMMD1Q8N668 190 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 FAM3DQ96BQ1 224 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 GON7Q9BXV9 100 aa13.94□□□□□ -0.18
COL9A3-212ENST00000481800 NOTCH1P46531 2555 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 VEGFCP49767 419 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 LSAMPQ13449 338 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 C2orf76Q3KRA6 126 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 FAM89BQ8N5H3 189 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 WFDC9Q8NEX5 89 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 OR56B1Q8NGI3 324 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 Q9H521 79 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 PLSCR3Q9NRY6 295 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 AK3Q9UIJ7 227 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 HSF4Q9ULV5 492 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 MGAT4AQ9UM21 535 aa13.93□□□□□ -0.18
COL9A3-212ENST00000481800 LINC01548A6NM66 108 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 NUDT19A8MXV4 375 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 RRP9O43818 475 aaKnown RBP13.92□□□□□ -0.18
COL9A3-212ENST00000481800 MYL9P24844 172 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 SOX6P35712 828 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 F2RL1P55085 397 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 RPL23AP62750 156 aaKnown RBP13.92□□□□□ -0.18
COL9A3-212ENST00000481800 MMDQ15546 238 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 SSX1Q16384 188 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 HES5Q5TA89 166 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 ZNF880Q6PDB4 577 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 REC114Q7Z4M0 266 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 MRPL20Q9BYC9 149 aaKnown RBP13.92□□□□□ -0.18
COL9A3-212ENST00000481800 ZFP57Q9NU63 452 aa13.92□□□□□ -0.18
COL9A3-212ENST00000481800 TRBV6-6A0A0A6YYG2 114 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 HSPA12AO43301 675 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 DENRO43583 198 aaKnown RBP13.91□□□□□ -0.18
COL9A3-212ENST00000481800 MRPS14O60783 128 aaKnown RBP13.91□□□□□ -0.18
COL9A3-212ENST00000481800 PRB2P02812 416 aaPredicted RBP13.91□□□□□ -0.18
COL9A3-212ENST00000481800 IGLL1P15814 213 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 OR3A3P47888 321 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 GABARAPL2P60520 117 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 PNLIPRP3Q17RR3 467 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 TEX38Q6PEX7 206 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 ZNF833PQ6ZTB9 187 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 ODF3L1Q8IXM7 274 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 PHF21AQ96BD5 680 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 ARHGAP5-AS1Q96IT6 56 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 NABP2Q9BQ15 211 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
COL9A3-212ENST00000481800 ZNF251Q9BRH9 671 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 HDHD3Q9BSH5 251 aaPredicted RBP13.91□□□□□ -0.18
COL9A3-212ENST00000481800 C12orf4Q9NQ89 552 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 NDUFB11Q9NX14 153 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 PIPOXQ9P0Z9 390 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 RAB22AQ9UL26 194 aa13.91□□□□□ -0.18
COL9A3-212ENST00000481800 CMYA5Q8N3K9 4069 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 SAA2-SAA4A0A096LPE2 208 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 TRAV1-2A0A0B4J238 106 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 RAB29O14966 203 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 ST8SIA5O15466 376 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 SAA2P0DJI9 122 aaPredicted RBP13.9□□□□□ -0.18
COL9A3-212ENST00000481800 TMEM50BP56557 158 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 HLA-DRB3P79483 266 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 MRPS15P82914 257 aaKnown RBP13.9□□□□□ -0.18
COL9A3-212ENST00000481800 FAM71E2Q8N5Q1 922 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 RBMXL1Q96E39 390 aaKnown RBP13.9□□□□□ -0.18
COL9A3-212ENST00000481800 PECRQ9BY49 303 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 IFI27L2Q9H2X8 130 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 NECAP2Q9NVZ3 263 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 SLC23A1Q9UHI7 598 aa13.9□□□□□ -0.18
COL9A3-212ENST00000481800 TMEM272A0A1B0GTI8 110 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 TRDV1A0A1B0GX56 115 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 FOXI3A8MTJ6 420 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-212ENST00000481800 SLC2A2P11168 524 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-212ENST00000481800 VDAC1P21796 283 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 ZBTB25P24278 435 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 SLC6A1P30531 599 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 CEACAM6P40199 344 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 ACTBP60709 375 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 FAM71F2Q6NXP2 309 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 CD200R1LQ6Q8B3 271 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 Q6ZPA2 131 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 KLHL30-AS1Q8NEE0 82 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 RCC1LQ96I51 464 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms