RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 GLRXP35754 106 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 ID1P41134 155 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 RPL29P47914 159 aaKnown RBP8.21□□□□□ -1.1
GARNL3-216ENST00000481242 ATP5J2P56134 94 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 UBE2L3P68036 154 aaKnown RBP8.21□□□□□ -1.1
GARNL3-216ENST00000481242 GUCA2BQ16661 112 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 SPNS3Q6ZMD2 512 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM105Q8N8V8 129 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 ZPLD1Q8TCW7 415 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 ITLN1Q8WWA0 313 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 PACRGQ96M98 296 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-216ENST00000481242 TIMP4Q99727 224 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 ST6GALNAC2Q9UJ37 374 aa8.21□□□□□ -1.1
GARNL3-216ENST00000481242 IGLV3-12A0A075B6K2 115 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF320A2RRD8 509 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 B4DEV8 164 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 IGHMP01871 453 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 GNG4P50150 75 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 SULT1A2P50226 295 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 CLEC18BQ6UXF7 455 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM91Q6ZNR0 172 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF738Q8NE65 137 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 DYNLRB2Q8TF09 96 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 CCL28Q9NRJ3 127 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 TRAV8-7A0A075B6U6 113 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 IGKV3D-11A0A0A0MRZ8 115 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 FAM24AA6NFZ4 105 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 SIAH2O43255 324 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 CDX1P47902 265 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-216ENST00000481242 SELENOTP62341 195 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 AESQ08117 197 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 LGALSLQ3ZCW2 172 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-216ENST00000481242 SIGLECL1Q8N7X8 197 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 PLXNA1Q9UIW2 1896 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 HIST1H1EP10412 219 aaKnown RBP8.2□□□□□ -1.1
GARNL3-216ENST00000481242 ORM2P19652 201 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF79Q15937 498 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM241Q24JQ0 296 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 VAX1Q5SQQ9 334 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 OR10A7Q8NGE5 316 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 GPA33Q99795 319 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 PPP1R3EQ9H7J1 279 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 ZDHHC11Q9H8X9 412 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 PRSS50Q9UI38 385 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 CACNA1IQ9P0X4 2223 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 MFNGO00587 321 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 PTGDSP41222 190 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 RPL27AP46776 148 aaKnown RBP8.2□□□□□ -1.1
GARNL3-216ENST00000481242 SULT1A1P50225 295 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 ANKRD55Q3KP44 614 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 APCDD1LQ8NCL9 501 aa8.2□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF703Q9H7S9 590 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-216ENST00000481242 A0A1W2PS18 150 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 J3QR06 171 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 NMBP08949 121 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MGAT2Q10469 447 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 FUT5Q11128 374 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 PNRC1Q12796 327 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 PIGYQ3MUY2 71 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 FA2HQ7L5A8 372 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 HSF4Q9ULV5 492 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 TDRD6O60522 2096 aaKnown RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 TRBV5-5A0A0J9YX44 114 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 OR2T8A6NH00 312 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 SMPD2O60906 423 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 HSBP1O75506 76 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 APOBEC3AP31941 199 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 TNFSF10P50591 281 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 C4orf17Q53FE4 359 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 C1orf100Q5SVJ3 147 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MRPL14Q6P1L8 145 aaKnown RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 STPG3Q8N7X2 389 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 NEU4Q8WWR8 484 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 CCL13Q99616 98 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MMP9P14780 707 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 HTR1DP28221 377 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 KIR3DL2P43630 455 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 GALR1P47211 349 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 PRSS12P56730 875 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MRPL52Q86TS9 123 aaKnown RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MUC15Q8N387 334 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 ABCA7Q8IZY2 2146 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MYO16Q9Y6X6 1858 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MEX3AA1L020 520 aaKnown RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 A8MXK9 166 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 CLDN34H7C241 214 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 CHST1O43916 411 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 CFDP00746 253 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MUC1P15941 1255 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 P2RY4P51582 365 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM33P57088 247 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 KLF9Q13886 244 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-216ENST00000481242 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 CD200R1LQ6Q8B3 271 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 DNM1P46Q6ZS02 220 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF429Q86V71 674 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 FAM57AQ8TBR7 257 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 ABHD14BQ96IU4 210 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 IMMP1LQ96LU5 166 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms