RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SHANK3Q9BYB0 1731 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 TNFSF10P50591 281 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 COL5A1-AS1Q5SY13 56 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM171Q8WVE6 324 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 PLPPR2Q96GM1 343 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 LINC00052Q96N35 136 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 CHST1O43916 411 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 KRTCAP3Q53RY4 240 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 PAPPA-AS1Q5QFB9 102 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 TEPPQ6URK8 271 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 TNFRSF12AQ9NP84 129 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 PARP11Q9NR21 331 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 TWIST1Q15672 202 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 ATG4DQ86TL0 474 aaPredicted RBP8.37□□□□□ -1.07
VEGFA-212ENST00000480614 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 MRGPRFQ96AM1 343 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 COX14Q96I36 57 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 DENND4AQ7Z401 1863 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 A0A1W2PR80 420 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 FAM157CP0CG43 387 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 S1PR2O95136 353 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 SHISA5Q8N114 240 aa8.37□□□□□ -1.07
VEGFA-212ENST00000480614 TAS2R60P59551 318 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 SPINK9Q5DT21 86 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 RSG1Q9BU20 258 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM255AQ5JRV8 349 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 H1FOOQ8IZA3 346 aaPredicted RBP8.36□□□□□ -1.07
VEGFA-212ENST00000480614 DEFB124Q8NES8 71 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 FBXW9Q5XUX1 488 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 RASL10BQ96S79 203 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 SF3B6Q9Y3B4 125 aaKnown RBP8.36□□□□□ -1.07
VEGFA-212ENST00000480614 MMDQ15546 238 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM30AQ9NV96 361 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 POLR2GP62487 172 aaKnown RBP eCLIP8.36□□□□□ -1.073e-11■□□□□ 8.4
VEGFA-212ENST00000480614 ROM1Q03395 351 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 JOSD1Q15040 202 aaPredicted RBP8.36□□□□□ -1.07
VEGFA-212ENST00000480614 DLL1O00548 723 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 ZDHHC8Q9ULC8 765 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM56-RWDD3S4R434 201 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 SUCLG1P53597 346 aaKnown RBP8.36□□□□□ -1.07
VEGFA-212ENST00000480614 RPL31P62899 125 aaKnown RBP8.36□□□□□ -1.07
VEGFA-212ENST00000480614 GPR35Q9HC97 309 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM131Q92545 1883 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 H0Y980 276 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 BCL2P10415 239 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 NAT2P11245 290 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 IER3P46695 156 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM50BP56557 158 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 PRO1933Q9H354 126 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 IGHV1OR15-9A0A0B4J2B8 117 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 SBK3P0C264 359 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 CISD3P0C7P0 127 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 TEX30Q5JUR7 227 aa8.36□□□□□ -1.07
VEGFA-212ENST00000480614 PPM1DO15297 605 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 FABP2P12104 132 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 MC5RP33032 325 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 SPEM2Q0P670 501 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 GALNT14Q96FL9 552 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 ELOVL1Q9BW60 279 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 STAG3L3P0CL85 134 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 HTN1P15515 57 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 GAB4Q2WGN9 574 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 PWWP2BQ6NUJ5 590 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
VEGFA-212ENST00000480614 A0A0U1RQV5 110 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM189A5PLL7 270 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 IFITM10A6NMD0 228 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 DIRC3C9JPN6 131 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 RPL36A-HNRNPH2H7BZ11 118 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 PGFP49763 221 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 DSPPQ9NZW4 1301 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 CLEC2AQ6UVW9 174 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 ADAT3Q96EY9 351 aaPredicted RBP8.35□□□□□ -1.07
VEGFA-212ENST00000480614 CXorf65A6NEN9 183 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 PRF1P14222 555 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 OTPQ5XKR4 325 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 TRBV23-1A0A0A0MS06 115 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 LMX1BO60663 402 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 GAPDHP04406 335 aaKnown RBP8.35□□□□□ -1.07
VEGFA-212ENST00000480614 ATP5IP56385 69 aaPredicted RBP8.35□□□□□ -1.07
VEGFA-212ENST00000480614 ORAI1Q96D31 301 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 OR51M1Q9H341 326 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 PLXNB3Q9ULL4 1909 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 PPP1R17O96001 155 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 DNAL4O96015 105 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 SPINK14Q6IE38 97 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 TRAV30A0A087WSZ9 112 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 HLA-DQA1P01909 254 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 MNX1P50219 401 aaPredicted RBP8.35□□□□□ -1.07
VEGFA-212ENST00000480614 ZNF519Q8TB69 540 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 BRWD3Q6RI45 1802 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 HPRT1P00492 218 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 SAMD13Q5VXD3 122 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 PRNTQ86SH4 94 aa8.35□□□□□ -1.07
VEGFA-212ENST00000480614 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
VEGFA-212ENST00000480614 DHRS7CA6NNS2 312 aa8.34□□□□□ -1.07
VEGFA-212ENST00000480614 CTGFP29279 349 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms