RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 BTBD17A6NE02 478 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 HLA-DQB1P01920 261 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 GSTT2P0CG29 244 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 GSTT2BP0CG30 244 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 RAB7AP51149 207 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 ARHGDIBP52566 201 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 OR2AK2Q8NG84 335 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 FAM216AQ8WUB2 273 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 MAFIPQ8WZ33 124 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 ST6GALNAC6Q969X2 333 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 RPEQ96AT9 228 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 DGCR14Q96DF8 476 aaKnown RBP15.93■□□□□ 0.14
LIME1-205ENST00000480139 MIXL1Q9H2W2 232 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 VPREB3Q9UKI3 123 aa15.93■□□□□ 0.14
LIME1-205ENST00000480139 TRBV6-7A0A0A0MS04 114 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 FAM25AB3EWG3 89 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 FAM25CB3EWG5 89 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 FAM25GB3EWG6 89 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 SLC31A2O15432 143 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 RGS5O15539 181 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 HSPA12AO43301 675 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 RPL15P61313 204 aaKnown RBP15.92■□□□□ 0.14
LIME1-205ENST00000480139 ZNF816Q0VGE8 651 aaPredicted RBP15.92■□□□□ 0.14
LIME1-205ENST00000480139 HOGA1Q86XE5 327 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 LAX1Q8IWV1 398 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 EDARADDQ8WWZ3 215 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 TOMM40LQ969M1 308 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 ST6GALNAC5Q9BVH7 336 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 CHIAQ9BZP6 476 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 OR1A1Q9P1Q5 309 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 A3GALT2U3KPV4 340 aa15.92■□□□□ 0.14
LIME1-205ENST00000480139 IGKV1D-8A0A087WSZ0 117 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 DPPA5A6NC42 116 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 H3BUX3 64 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 CTDSP2O14595 271 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 CTXN2P0C2S0 81 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 PAX6P26367 422 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 PRSS3P35030 304 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 CEACAM6P40199 344 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 SRSF2Q01130 221 aaKnown RBP15.91■□□□□ 0.14
LIME1-205ENST00000480139 IGSF11Q5DX21 431 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 OR8H3Q8N146 312 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 DTX3Q8N9I9 347 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 OR10J5Q8NHC4 309 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 MCFD2Q8NI22 146 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 PIFOQ8TCI5 191 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 C15orf40Q8WUR7 153 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 DUX5Q96PT3 197 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 GHITMQ9H3K2 345 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 SCPEP1Q9HB40 452 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 ABCB10Q9NRK6 738 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 EXTL2Q9UBQ6 330 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 ANXA10Q9UJ72 324 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 ANAPC10Q9UM13 185 aa15.91■□□□□ 0.14
LIME1-205ENST00000480139 HSD17B6O14756 317 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 TXNL1O43396 289 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 PTHLHP12272 177 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 BRS3P32247 399 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 C16orf87Q6PH81 154 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 CNIH2Q6PI25 160 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 LIAT1Q6ZQX7 453 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 BEST4Q8NFU0 473 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 TMEM158Q8WZ71 300 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 DCUN1D5Q9BTE7 237 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 C6orf62Q9GZU0 229 aaPredicted RBP15.9■□□□□ 0.14
LIME1-205ENST00000480139 IFI27L2Q9H2X8 130 aa15.9■□□□□ 0.14
LIME1-205ENST00000480139 A0A1W2PPI3 338 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 BET1O15155 118 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 GAPDHP04406 335 aaKnown RBP15.89■□□□□ 0.13
LIME1-205ENST00000480139 LPLP06858 475 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 KRTAP24-1Q3LI83 254 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 FAM71F2Q6NXP2 309 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 ODF3L1Q8IXM7 274 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 LYG1Q8N1E2 194 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 GPX8Q8TED1 209 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 RTN4IP1Q8WWV3 396 aaPredicted RBP15.89■□□□□ 0.13
LIME1-205ENST00000480139 AGMATQ9BSE5 352 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 MMP27Q9H306 513 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 RDH8Q9NYR8 311 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 RABL2AQ9UBK7 228 aaPredicted RBP15.89■□□□□ 0.13
LIME1-205ENST00000480139 RABL2BQ9UNT1 228 aa15.89■□□□□ 0.13
LIME1-205ENST00000480139 MRPS7Q9Y2R9 242 aaKnown RBP15.89■□□□□ 0.13
LIME1-205ENST00000480139 SULT1C2O00338 296 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 LANCL1O43813 399 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 DIAPH2-AS1Q14236 149 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 HABP2Q14520 560 aaPredicted RBP15.88■□□□□ 0.13
LIME1-205ENST00000480139 PLA1AQ53H76 456 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 SNX29P2Q8IUI4 249 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 GVQW1Q8N7I0 195 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 GINS4Q9BRT9 223 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 PARP12Q9H0J9 701 aaKnown RBP15.88■□□□□ 0.13
LIME1-205ENST00000480139 C11orf54Q9H0W9 315 aaPredicted RBP15.88■□□□□ 0.13
LIME1-205ENST00000480139 IFT46Q9NQC8 304 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 PIPOXQ9P0Z9 390 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 PITPNC1Q9UKF7 332 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 TCF19Q9Y242 345 aa15.88■□□□□ 0.13
LIME1-205ENST00000480139 IGHV1-3A0A0C4DH29 117 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 RAB29O14966 203 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 GPR137BO60478 399 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 NAT1P18440 290 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms