RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CDH26Q8IXH8 852 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 MS4A15Q8N5U1 240 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 LINC00311Q8N616 119 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 C8orf31Q8N9H6 132 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 Q8N9W7 124 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 OR11H1Q8NG94 326 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 KCNG3Q8TAE7 436 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 UFD1Q92890 307 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 TMEM203Q969S6 136 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 RAX2Q96IS3 184 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 KCTD7Q96MP8 289 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 PRR25Q96S07 402 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 MRPL20Q9BYC9 149 aaKnown RBP5.57□□□□□ -1.52
COL17A1-205ENST00000480127 GHITMQ9H3K2 345 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 DCLRE1BQ9H816 532 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 LINC00574Q9H8X3 128 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 GAR1Q9NY12 217 aaKnown RBP5.57□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF221Q9UK13 617 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 JPT1Q9UK76 154 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 VSIG4Q9Y279 399 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 STAB2Q8WWQ8 2551 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 TRAV41A0A0B4J266 112 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 ERICH4A6NGS2 130 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 RAB29O14966 203 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 NBR2O15453 112 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 ST8SIA5O15466 376 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 LALBAP00709 142 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 APOA2P02652 100 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 CGB3P0DN86 165 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 CGB7P0DN87 165 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 ARSBP15848 533 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 CPEP16870 476 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 IGFBP3P17936 291 aaPredicted RBP5.56□□□□□ -1.52
COL17A1-205ENST00000480127 HTR2CP28335 458 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 OR3A3P47888 321 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 F2RL1P55085 397 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 GNB1P62873 340 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF616Q08AN1 781 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 LSAMPQ13449 338 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 GNMTQ14749 295 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 RAB11BQ15907 218 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 MORN2Q502X0 79 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 CT45A1Q5HYN5 189 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 STEAP3Q658P3 488 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 OR10K2Q6IF99 312 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 FAM131AQ6UXB0 335 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 TMEM104Q8NE00 496 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 Q8NFD4 153 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 CT45A3Q8NHU0 189 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 MUC7Q8TAX7 377 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 C4orf3Q8WVX3 66 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 EDARADDQ8WWZ3 215 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 Q96M66 194 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 CLCC1Q96S66 551 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 ASCL2Q99929 193 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 HSPB9Q9BQS6 159 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 FAAP24Q9BTP7 215 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 RSRP1Q9BUV0 290 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 VCX3BQ9H321 246 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 SLC23A1Q9UHI7 598 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 MGAT4AQ9UM21 535 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 TPRKBQ9Y3C4 175 aa5.56□□□□□ -1.52
COL17A1-205ENST00000480127 DYNC2H1Q8NCM8 4307 aaKnown RBP5.56□□□□□ -1.52
COL17A1-205ENST00000480127 A0A075B6Q4 140 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 SAA2-SAA4A0A096LPE2 208 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 TRBV5-7A0A0A0MS05 114 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 A0A1W2PN81 502 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 LINC01548A6NM66 108 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 ATP6V0E1O15342 81 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 GPX5O75715 221 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 ARL6IP5O75915 188 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 BPNT1O95861 308 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 IGHG4P01861 327 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 GNAO1P09471 354 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 CD3GP09693 182 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 SAA2P0DJI9 122 aaPredicted RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 ZBTB25P24278 435 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 CHRNA7P36544 502 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 TALDO1P37837 337 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 CEACAM6P40199 344 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 CDX1P47902 265 aaPredicted RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 TPPP2P59282 170 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 RPS16P62249 146 aaKnown RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 HTD2P86397 168 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 EBI3Q14213 229 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 KIR2DS1Q14954 304 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 P2RY14Q15391 338 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 SPHARQ15513 63 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 LIPKQ5VXJ0 399 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 FAM53AQ6NSI3 398 aaPredicted RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 C6orf201Q7Z4U5 140 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF554Q86TJ5 538 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 OR1N2Q8NGR9 330 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 GRPEL2Q8TAA5 225 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 MRPL30Q8TCC3 161 aaKnown RBP5.55□□□□□ -1.52
COL17A1-205ENST00000480127 PGLYRP3Q96LB9 341 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 OR4C12Q96R67 309 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 P2RX4Q99571 388 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 PHB2Q99623 299 aa5.55□□□□□ -1.52
COL17A1-205ENST00000480127 CHCHD6Q9BRQ6 235 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms