RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 RNF115Q9Y4L5 304 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 KALRNO60229 2985 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 FASNP49327 2511 aaKnown RBP11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 IGKV1D-8A0A087WSZ0 117 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 IL3RAP26951 378 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 SERF2P84101 59 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 DGAT2L6Q6ZPD8 337 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 TMEM144Q7Z5S9 345 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 KLHDC1Q8N7A1 406 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 VN1R17PQ8TDU5 208 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 FAM60AQ9NP50 221 aa11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
CNKSR3-204ENST00000479339 BAHCC1Q9P281 2608 aa11.27□□□□□ -0.6
CNKSR3-204ENST00000479339 PRSS47A8MTI9 375 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 H3BMH7 237 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 ONECUT2O95948 504 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 TNFSF4P23510 183 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 GCH1P30793 250 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 NPBWR2P48146 333 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 LCN15Q6UWW0 184 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 C20orf196Q8IYI0 205 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 SPACA5Q96QH8 159 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 TXN2Q99757 166 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 RPRMQ9NS64 109 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 LANCL2Q9NS86 450 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 CPAMD8Q8IZJ3 1885 aa11.27□□□□□ -0.61
CNKSR3-204ENST00000479339 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 ZNF737O75373 536 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 CST7O76096 145 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 MPZL1O95297 269 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 CCL1P22362 96 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 YPEL3P61236 119 aaPredicted RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 MSMO1Q15800 293 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 LINC00346Q8IVM7 164 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 WDFY1Q8IWB7 410 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 ODF3L1Q8IXM7 274 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 OR5D18Q8NGL1 313 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 RPUSD4Q96CM3 377 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 MCTS1Q9ULC4 181 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 SNRNP200O75643 2136 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 ZNF850A8MQ14 1090 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 HS3ST1O14792 307 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 GYPAP02724 150 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 IGLC3P0DOY3 106 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 HOXC12P31275 282 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 MDH2P40926 338 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 RPS18P62269 152 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 ARF6P62330 175 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 FOXL1Q12952 345 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 EXT1Q16394 746 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 SPATA45Q537H7 98 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 PHLDA2Q53GA4 152 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 Q6ZN92 141 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 CPEB2Q7Z5Q1 589 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 METTL27Q8N6F8 245 aaPredicted RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 OR5B3Q8NH48 314 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 OR51E1Q8TCB6 317 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 RERGQ96A58 199 aaPredicted RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 APH1AQ96BI3 265 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 TMEM56Q96MV1 263 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 TMEM222Q9H0R3 208 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 PARLQ9H300 379 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 ZNF286AQ9HBT8 521 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 RPH3ALQ9UNE2 315 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 TMEM56-RWDD3S4R434 201 aa11.26□□□□□ -0.61
CNKSR3-204ENST00000479339 MPDZO75970 2070 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 CFAP46Q8IYW2 2715 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 HCRTR1O43613 425 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 NUPR1O60356 82 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 APOBEC3AP31941 199 aaPredicted RBP11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 PSMB3P49720 205 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 ID3Q02535 119 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 NSDHLQ15738 373 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 ZNF726P1Q15940 193 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 DOK3Q7L591 496 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 RNF144BQ7Z419 303 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 TMEM217Q8N7C4 229 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 ZNF709Q8N972 641 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 GATSQ8NAP1 163 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 PGAM5Q96HS1 289 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 ZNF703Q9H7S9 590 aaPredicted RBP11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 PLEKHJ1Q9NW61 149 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 ZNF586Q9NXT0 402 aa11.25□□□□□ -0.61
CNKSR3-204ENST00000479339 NXT1Q9UKK6 140 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms