RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 NSDHLQ15738 373 aa18.14■□□□□ 0.49
SDF4-206ENST00000478938 ACSM6Q6P461 480 aa18.14■□□□□ 0.49
SDF4-206ENST00000478938 OR4C12Q96R67 309 aa18.14■□□□□ 0.49
SDF4-206ENST00000478938 WDR61Q9GZS3 305 aaKnown RBP18.14■□□□□ 0.49
SDF4-206ENST00000478938 GNB4Q9HAV0 340 aa18.14■□□□□ 0.49
SDF4-206ENST00000478938 TP73-AS1Q9UF72 201 aa18.14■□□□□ 0.49
SDF4-206ENST00000478938 KLHDC7BQ96G42 594 aa18.14■□□□□ 0.49
SDF4-206ENST00000478938 NOTCH4Q99466 2003 aa18.14■□□□□ 0.49
SDF4-206ENST00000478938 K7ERU9 68 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 SAP30O75446 220 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 C3orf79P0CE67 100 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 DEFA4P12838 97 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 CD99P14209 185 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 OR4F17Q8NGA8 305 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 FAM131CQ96AQ9 280 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 SFRP2Q96HF1 295 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 DPRXA6NFQ7 191 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 OR2T8A6NH00 312 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 J3QW42 95 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 OR5P3Q8WZ94 311 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 PNRC2Q9NPJ4 139 aaKnown RBP18.13■□□□□ 0.49
SDF4-206ENST00000478938 PIGLQ9Y2B2 252 aa18.13■□□□□ 0.49
SDF4-206ENST00000478938 C11orf94C9JXX5 98 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 NAPSAO96009 420 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 GLB1P16278 677 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 BMI1P35226 326 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 WASP42768 502 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 TM4SF4P48230 202 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 IGLV3-21P80748 117 aaPredicted RBP18.12■□□□□ 0.49
SDF4-206ENST00000478938 LCN12Q6JVE5 192 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 ZNF721Q8TF20 911 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 KIAA1324LA8MWY0 1029 aaPredicted RBP18.12■□□□□ 0.49
SDF4-206ENST00000478938 FCN1O00602 326 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 THBS3P49746 956 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 GNB1P62873 340 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 PMP22Q01453 160 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 NIT1Q86X76 327 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 TAF15Q92804 592 aaKnown RBP eCLIP18.12■□□□□ 0.49
SDF4-206ENST00000478938 RCHY1Q96PM5 261 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 SH3BGRL2Q9UJC5 107 aa18.12■□□□□ 0.49
SDF4-206ENST00000478938 VAMP5O95183 116 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 ACRP10323 421 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 GFRA1P56159 465 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 Q0VG73 95 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 OR1K1Q8NGR3 316 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 GOSR1O95249 250 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 UCP1P25874 307 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 CLDN18P56856 261 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 RPS20P60866 119 aaKnown RBP18.11■□□□□ 0.49
SDF4-206ENST00000478938 KRTCAP3Q53RY4 240 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 AMMECR1LQ6DCA0 310 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 CDC42EP3Q9UKI2 254 aa18.11■□□□□ 0.49
SDF4-206ENST00000478938 ARHGEF17Q96PE2 2063 aaPredicted RBP18.1■□□□□ 0.49
SDF4-206ENST00000478938 A0A1W2PP55 124 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 TAX1BP3O14907 124 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 NDUFB4O95168 129 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 KITLGP21583 273 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 ARR3P36575 388 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 IER3P46695 156 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 ZNF90Q03938 601 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 CARD17Q5XLA6 110 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 RAB40CQ96S21 281 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 PSENENQ9NZ42 101 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 ERRFI1Q9UJM3 462 aaPredicted RBP18.1■□□□□ 0.49
SDF4-206ENST00000478938 IGKV1D-13A0A0B4J2D9 117 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 ZNF816-ZNF321PA0A0X1KG74 233 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 MDFIC2A0A1B0GVS7 189 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 PRSS38A1L453 326 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 OTOL1A6NHN0 477 aaPredicted RBP18.1■□□□□ 0.49
SDF4-206ENST00000478938 IGKV1-13P0DP09 117 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 GABRA2P47869 451 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 CDC34P49427 236 aaPredicted RBP18.1■□□□□ 0.49
SDF4-206ENST00000478938 H1FNTQ75WM6 255 aaPredicted RBP18.1■□□□□ 0.49
SDF4-206ENST00000478938 PATE1Q8WXA2 126 aa18.1■□□□□ 0.49
SDF4-206ENST00000478938 MRPL27Q9P0M9 148 aaKnown RBP18.1■□□□□ 0.49
SDF4-206ENST00000478938 CTXND1A0A1B0GTU2 59 aa18.09■□□□□ 0.49
SDF4-206ENST00000478938 VEGFBP49765 207 aa18.09■□□□□ 0.49
SDF4-206ENST00000478938 ARG2P78540 354 aa18.09■□□□□ 0.49
SDF4-206ENST00000478938 RAET1LQ5VY80 246 aa18.09■□□□□ 0.49
SDF4-206ENST00000478938 MUC15Q8N387 334 aa18.09■□□□□ 0.49
SDF4-206ENST00000478938 PNO1Q9NRX1 252 aaKnown RBP18.09■□□□□ 0.49
SDF4-206ENST00000478938 Q6ZRM9 215 aa18.09■□□□□ 0.49
SDF4-206ENST00000478938 DEFB128Q7Z7B8 93 aa18.09■□□□□ 0.49
SDF4-206ENST00000478938 A0A1W2PS18 150 aa18.08■□□□□ 0.49
SDF4-206ENST00000478938 IGHG1P01857 330 aa18.08■□□□□ 0.49
SDF4-206ENST00000478938 ZNF83P51522 516 aa18.08■□□□□ 0.49
SDF4-206ENST00000478938 PRSS12P56730 875 aa18.08■□□□□ 0.49
SDF4-206ENST00000478938 RELBQ01201 579 aa18.08■□□□□ 0.49
SDF4-206ENST00000478938 HLA-DRB5Q30154 266 aa18.08■□□□□ 0.49
SDF4-206ENST00000478938 GAGE12BA1L429 117 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 SNURFLB1AK76 121 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 F5H5K5 113 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 DHRS3O75911 302 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 ATP5G3P48201 142 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 LRRC10Q5BKY1 277 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 SFTPA2Q8IWL1 248 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 ZDHHC23Q8IYP9 409 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 FAM19A2Q8N3H0 131 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 OR10G9Q8NGN4 311 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 OR10G7Q8NGN6 311 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms