RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TMEM59Q9BXS4 323 aa11.33□□□□□ -0.6
SMARCE1-209ENST00000478349 GHITMQ9H3K2 345 aa11.33□□□□□ -0.6
SMARCE1-209ENST00000478349 CHMP1AQ9HD42 196 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-209ENST00000478349 PIPOXQ9P0Z9 390 aa11.33□□□□□ -0.6
SMARCE1-209ENST00000478349 MGAT4AQ9UM21 535 aa11.33□□□□□ -0.6
SMARCE1-209ENST00000478349 LINC01548A6NM66 108 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 SEC14L6B5MCN3 397 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 SLC2A2P11168 524 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 PSMB8P28062 276 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 PPP1CCP36873 323 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 ZNF134P52741 427 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 CFHR3Q02985 330 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 GABPB1Q06547 395 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 NANOGP1Q8N7R0 232 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 MRPL30Q8TCC3 161 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 UBE2E2Q96LR5 201 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 DUX3Q96PT4 197 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 RIMS4Q9H426 269 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 PARP11Q9NR21 331 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 VSIG4Q9Y279 399 aa11.32□□□□□ -0.6
SMARCE1-209ENST00000478349 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 BPNT1O95861 308 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 F2RL1P55085 397 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 RPS27AP62979 156 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 ACSM3Q53FZ2 586 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 LYPD6Q86Y78 171 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 IL1F10Q8WWZ1 152 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 OR51J1Q9H342 316 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 SCN3BQ9NY72 215 aa11.31□□□□□ -0.6
SMARCE1-209ENST00000478349 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 OR5H14A6NHG9 310 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 RAB29O14966 203 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 RBBP9O75884 186 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 CHATP28329 748 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 HTR2CP28335 458 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 CD40LGP29965 261 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 MC5RP33032 325 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 VHLP40337 213 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 FHL3Q13643 280 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 GNMTQ14749 295 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 PLGLAQ15195 96 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 HMGN3Q15651 99 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 HSD17B12Q53GQ0 312 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 RNLSQ5VYX0 342 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 SIGIRRQ6IA17 410 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 LIN54Q6MZP7 749 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 FAM53AQ6NSI3 398 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 C11orf87Q6NUJ2 197 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 OR11H1Q8NG94 326 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 OR6M1Q8NGM8 313 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 FBLIM1Q8WUP2 373 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 URM1Q9BTM9 101 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 PLEKHJ1Q9NW61 149 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 RNF150Q9ULK6 438 aa11.3□□□□□ -0.6
SMARCE1-209ENST00000478349 SAA2-SAA4A0A096LPE2 208 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 GNAO1P09471 354 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 SAA2P0DJI9 122 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 ECI1P42126 302 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 RUNX1Q01196 453 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 TMEM267Q0VDI3 215 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 C1orf100Q5SVJ3 147 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 C6orf141Q5SZD1 244 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 FAM27D1Q5T7N8 215 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 PYHIN1Q6K0P9 492 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 SVOPQ8N4V2 548 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 NPBQ8NG41 125 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 MYOZ3Q8TDC0 251 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 UFD1Q92890 307 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 TMED9Q9BVK6 235 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 SLC23A1Q9UHI7 598 aa11.29□□□□□ -0.6
SMARCE1-209ENST00000478349 CASQ2O14958 399 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 HSPA12AO43301 675 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 ARL6IP5O75915 188 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 CDK1P06493 297 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 PSMA1P25786 263 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 BLVRBP30043 206 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 SPHARQ15513 63 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 TRAM1Q15629 374 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 ZNF260Q3ZCT1 412 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 ZNF660Q6AZW8 331 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 OR1N2Q8NGR9 330 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 SULT4A1Q9BR01 284 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 ANKRD60Q9BZ19 345 aa11.28□□□□□ -0.6
SMARCE1-209ENST00000478349 PLGRKTQ9HBL7 147 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms