RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 OR4C6Q8NH72 309 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 ZNF707Q96C28 371 aaPredicted RBP-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 APOL4Q9BPW4 351 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 FAM192AQ9GZU8 254 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 IL22Q9GZX6 179 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 ARMC7Q9H6L4 198 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 MRPS30Q9NP92 439 aaKnown RBP-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 SNX12Q9UMY4 172 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 GMEB1Q9Y692 573 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 HERC1Q15751 4861 aa-0.68□□□□□ -2.52
NCKAP1-204ENST00000477988 A0A087WX48 190 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 OR5K4A6NMS3 321 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 H7C2Y5 167 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 TRAPPC6AO75865 159 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 CCL3P10147 92 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 LIPCP11150 499 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 CD82P27701 267 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 GABRR2P28476 465 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 XCL1P47992 114 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 TSPEAR-AS2P59090 65 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 RPL31P62899 125 aaKnown RBP-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 BEX5Q5H9J7 111 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 EBLN2Q6P2I7 272 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 FAM43BQ6ZT52 329 aaPredicted RBP-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 DCXRQ7Z4W1 244 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 C9orf163Q8N9P6 203 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 OR51T1Q8NGJ9 327 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 CHP1Q99653 195 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 EBNA1BP2Q99848 306 aaKnown RBP-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 PRRT1Q99946 306 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 CHRNA10Q9GZZ6 450 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 DNAJC27Q9NZQ0 273 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 ZFP30Q9Y2G7 519 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 CACNA1HO95180 2353 aa-0.69□□□□□ -2.52
NCKAP1-204ENST00000477988 MAP1AP78559 2803 aaPredicted RBP-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 LRRIQ4A6NIV6 560 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 HMSDA8MTL9 139 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 B4DEV8 164 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 K7EIL1 84 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 BHLHE40O14503 412 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 MT-CO2P00403 227 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 PSMA1P25786 263 aaKnown RBP-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 CBX5P45973 191 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 HSPA13P48723 471 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 EFNA4P52798 201 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 MP68P56378 58 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 TMEM249Q2WGJ8 235 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 SPINK9Q5DT21 86 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 FNDC9Q8TBE3 224 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 FAAP24Q9BTP7 215 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 FBXL15Q9H469 300 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 HAUS4Q9H6D7 363 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 LYRM4Q9HD34 91 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 NMRK1Q9NWW6 199 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 SCML1Q9UN30 329 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 ALG5Q9Y673 324 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 FLT4P35916 1363 aa-0.7□□□□□ -2.52
NCKAP1-204ENST00000477988 ALMS1Q8TCU4 4167 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 DCHS2Q6V1P9 2916 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 SNRNP200O75643 2136 aaKnown RBP-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 PTPRSQ13332 1948 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 DENND4CQ5VZ89 1909 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 PMCHP20382 165 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 CCNOP22674 350 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 NPPCP23582 126 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 CD24P25063 80 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 CCR2P41597 374 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 GABARAPL2P60520 117 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 SLC35B1P78383 322 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 TMEM267Q0VDI3 215 aaPredicted RBP-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 PDK2Q15119 407 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 TAS2R42Q7RTR8 314 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 UMODL1-AS1Q8N2C9 162 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 EXOC3-AS1Q8N2X6 119 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 C12orf29Q8N999 325 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 OR9I1Q8NGQ6 314 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 CLDND2Q8NHS1 167 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 ASB13Q8WXK3 278 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 MCUR1Q96AQ8 359 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 ACBD6Q9BR61 282 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 DOHHQ9BU89 302 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 TRABDQ9H4I3 376 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 C11orf49Q9H6J7 331 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 CELSR2Q9HCU4 2923 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 RALGAPA2Q2PPJ7 1873 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 TONSLQ96HA7 1378 aa-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 PHRF1Q9P1Y6 1649 aaKnown RBP-0.71□□□□□ -2.52
NCKAP1-204ENST00000477988 ASCC3Q8N3C0 2202 aaKnown RBP-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 LINC00854A0A1B0GVQ3 168 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 FGF16O43320 207 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 OR2T1O43869 369 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 ORC5O43913 435 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 PDCD6O75340 191 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 CRYBA1P05813 215 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 KLK1P06870 262 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 UCHL1P09936 223 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 TSPOP30536 169 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 PYCR1P32322 319 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 CLDN18P56856 261 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 FGF12P61328 243 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms