RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PDCD6O75340 191 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 UPK1BO75841 260 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 OR7C1O76099 320 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 ACAA1P09110 424 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A15PP0C7V4 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A13PP0C7W8 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A14PP0C7W9 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A24PP0C7X0 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 HIST1H1DP16402 221 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 GLRA1P23415 457 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 BLVRBP30043 206 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 INPP1P49441 399 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 ERVK11-1P61568 191 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 IL13RA2Q14627 380 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 ARL6IP1Q15041 203 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 RNASE12Q5GAN4 147 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 SPIN3Q5JUX0 258 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 LDLRAD2Q5SZI1 272 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNF782Q6ZMW2 699 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNF329Q86UD4 541 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 OR8H2Q8N162 312 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM58AQ8N1B3 248 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 OR5M8Q8NGP6 311 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 OR10Z1Q8NGY1 313 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 GATAD1Q8WUU5 269 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 SMIM4Q8WVI0 70 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 NEDD4LQ96PU5 975 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 WDR13Q9H1Z4 485 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 AUNIPQ9H7T9 357 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 SPACA1Q9HBV2 294 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 C19orf12Q9NSK7 152 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 IL36RNQ9UBH0 155 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 TBL2Q9Y4P3 447 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 TMEM235A6NFC5 223 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 FOXI3A8MTJ6 420 aaPredicted RBP7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 SERPINE3A8MV23 424 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 F8VVB4 439 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 F8VWA3 439 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 GABARAPH6UMI1 98 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 MFNGO00587 321 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 SOCS1O15524 211 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 GSTZ1O43708 216 aaPredicted RBP7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 SLC25A17O43808 307 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 HLA-DQB1P01920 261 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 GSTP1P09211 210 aaKnown RBP7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 IL7P13232 177 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 SLC6A1P30531 599 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 GABRA2P47869 451 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 DYNLT3P51808 116 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 GNG2P59768 71 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 C9orf152Q5JTZ5 239 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM89BQ8N5H3 189 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 C11orf42Q8N5U0 333 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNRF1Q8ND25 227 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 TMEM185AQ8NFB2 350 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 ANGPTL6Q8NI99 470 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 CAPSLQ8WWF8 208 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 FCAMRQ8WWV6 532 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 RAX2Q96IS3 184 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 ARHGAP5-AS1Q96IT6 56 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 ABHD1Q96SE0 405 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 TM2D3Q9BRN9 247 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 HES4Q9HCC6 221 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 RASL12Q9NYN1 266 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 GLS2Q9UI32 602 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 HILPDAQ9Y5L2 63 aa7.66□□□□□ -1.18
SMARCB1-206ENST00000477836 hCG_1809904A0A1W2PP81 198 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 A0A1W2PPE2 198 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 A0A1W2PPH5 198 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 A0A1W2PR64 198 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 A0A1W2PRV1 198 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 CCL24O00175 119 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 CD3GP09693 182 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 PTHLHP12272 177 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNF44P15621 663 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 GNB3P16520 340 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 CCL3L1P16619 93 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 PRSS3P35030 304 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 ACTBP60709 375 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 MRPS15P82914 257 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 ARFRP1Q13795 201 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 PNLIPRP3Q17RR3 467 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNF260Q3ZCT1 412 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 PLAC9Q5JTB6 97 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 HACD4Q5VWC8 232 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 ACP7Q6ZNF0 438 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 C16orf82Q7Z2V1 217 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 TRIM63Q969Q1 353 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 AKR1E2Q96JD6 320 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 SDHCQ99643 169 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 SCPEP1Q9HB40 452 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 ZFP57Q9NU63 452 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 PLEKHJ1Q9NW61 149 aa7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 RCC2Q9P258 522 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-206ENST00000477836 ODF3BA8MYP8 253 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 SULT1C2O00338 296 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 HSPB6O14558 160 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 CA11O75493 328 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 HAND1O96004 215 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 FUT3P21217 361 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms