RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 HLA-DQA1Q5Y7H0 255 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 RHBDD2Q6NTF9 364 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 LHFPL1Q86WI0 220 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 FBXL14Q8N1E6 418 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 C17orf78Q8N4C9 275 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 OR6N2Q8NGY6 317 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 SLC25A40Q8TBP6 338 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A1B0GUS0 222 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A1B0GWA3 101 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 MEGF11A6BM72 1044 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 FRG2CA6NGY1 282 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 C1QTNF9BB2RNN3 333 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 M0R1X1 148 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 LYPD3O95274 346 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 CER1O95813 267 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 IFNA1P01562 189 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 CLPSP04118 112 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 SFTPDP35247 375 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 ACSF3Q4G176 576 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 CALHM1Q8IU99 346 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 TMEM123Q8N131 208 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 PRR13Q9NZ81 148 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 GNG13Q9P2W3 67 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 CKLFQ9UBR5 152 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 C17orf112F2Z3M2 114 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 IGKV3-11P04433 115 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 GPX1P07203 203 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 PF4V1P10720 104 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 GUCA1AP43080 201 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 NPBWR2P48146 333 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 PLP1P60201 277 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 HSD52Q0P140 79 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 GNMTQ14749 295 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 SPIN3Q5JUX0 258 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 ATG4DQ86TL0 474 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 OR52E2Q8NGJ4 325 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 KLHDC2Q9Y2U9 406 aa10.87□□□□□ -0.67
RTFDC1-207ENST00000477573 PDE6DO43924 150 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 CRISP2P16562 243 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 ECI1P42126 302 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 CDKN2AP42771 156 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 PIGPP57054 158 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 PLAURQ03405 335 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 FOXL1Q12952 345 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 CD300EQ496F6 205 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 WBP2NLQ6ICG8 309 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 LCN10Q6JVE6 187 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 OR10G3Q8NGC4 313 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 OR4C3Q8NH37 302 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 PFN4Q8NHR9 129 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 ZNF721Q8TF20 911 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 FAM46BQ96A09 425 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 DERL1Q9BUN8 251 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 SLC7A10Q9NS82 523 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 RARRES3Q9UL19 164 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 HIF3AQ9Y2N7 669 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 SAA2-SAA4A0A096LPE2 208 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 LY6G6EA0A0G2JKS1 128 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 DPRXA6NFQ7 191 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 RAB29O14966 203 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 VENTXO95231 258 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 CGAP01215 116 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 FUT1P19526 365 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 FSTP19883 344 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 ADMP35318 185 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 GFRA1P56159 465 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 MLF1P58340 268 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 GLYATL3Q5SZD4 288 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 BVES-AS1Q5T3Y7 98 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 MRPL54Q6P161 138 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 VN1R1Q9GZP7 353 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 ZNF160Q9HCG1 818 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 C20orf141Q9NUB4 165 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 JPT1Q9UK76 154 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 U3KQA8 63 aa10.86□□□□□ -0.67
RTFDC1-207ENST00000477573 COL6A3P12111 3177 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 IGHV5-10-1A0A0J9YXX1 117 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A1W2PQM1 296 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 TMEM250H0YL14 139 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 BRI3O95415 125 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 ZNF93P35789 620 aaPredicted RBP10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 EWSR1Q01844 656 aaKnown RBP eCLIP10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 LTC4SQ16873 150 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 TMEM177Q53S58 311 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 C1orf100Q5SVJ3 147 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 C19orf35Q6ZS72 473 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 OR10P1Q8NGE3 313 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 LINC00470Q9BZP3 86 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 NXF5Q9H1B4 397 aaKnown RBP10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 TMEM140Q9NV12 185 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 B3GALT5Q9Y2C3 310 aa10.85□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A0G2JMM0 328 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A0U1RQK1 487 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A1B0GW15 77 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A1W2PPB8 328 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 KIR3DP1A8MWS1 328 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms