RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 NICN1Q9BSH3 213 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 DPCDQ9BVM2 203 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF286AQ9HBT8 521 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 TAS2R3Q9NYW6 316 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 PLA2G2EQ9NZK7 142 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 MTFP1Q9UDX5 166 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF107Q9UII5 783 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 TBC1D24Q9ULP9 559 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 HSF4Q9ULV5 492 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 RBMX2Q9Y388 322 aaKnown RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 A0A0A6YYD4 124 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 LINC00854A0A1B0GVQ3 168 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 TMEM235A6NFC5 223 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF729A6NN14 1252 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-221ENST00000477561 MFNGO00587 321 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 TOR1AO14656 332 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 SOCS1O15524 211 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 LYRM1O43325 122 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 ORC5O43913 435 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 TSPAN9O75954 239 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 CSN2P05814 226 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 GNB3P16520 340 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 CD24P25063 80 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 HTR1DP28221 377 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 RCVRNP35243 200 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 RBM11P57052 281 aaKnown RBP6.67□□□□□ -1.34
HDAC6-221ENST00000477561 PROK1P58294 105 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 TAS2R19P59542 299 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 ARFRP1Q13795 201 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 RBM39Q14498 530 aaKnown RBP6.67□□□□□ -1.34
HDAC6-221ENST00000477561 AANATQ16613 207 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 RSBN1Q5VWQ0 802 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-221ENST00000477561 OR52W1Q6IF63 320 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF565Q8N9K5 539 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 OR4P4Q8NGL7 312 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 UBALD1Q8TB05 177 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 NEK7Q8TDX7 302 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 CCDC107Q8WV48 283 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 LEAP2Q969E1 77 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 CYYR1Q96J86 154 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 PECRQ9BY49 303 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 C11orf54Q9H0W9 315 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-221ENST00000477561 C16orf95Q9H693 158 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 SPACA1Q9HBV2 294 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 IFT46Q9NQC8 304 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 PLEKHJ1Q9NW61 149 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 CALYQ9NYX4 217 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 OR6C3Q9NZP0 311 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 DSCAML1Q8TD84 2053 aa6.67□□□□□ -1.34
HDAC6-221ENST00000477561 KBTBD11-OT1A0A1B0GTJ5 212 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 FAM240BA0A1B0GVZ2 78 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 ANKRD20A5PA0PJZ0 165 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 A6NDX4 124 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 FOXI3A8MTJ6 420 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-221ENST00000477561 F2RL2O00254 374 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 PLA2G10O15496 165 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 LANCL1O43813 399 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 PDCD6O75340 191 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 GLAP06280 429 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 CGB3P0DN86 165 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 CGB7P0DN87 165 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 PTHLHP12272 177 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 FUT3P21217 361 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 TMEM50BP56557 158 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 KLF9Q13886 244 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-221ENST00000477561 HABP2Q14520 560 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-221ENST00000477561 PLAC9Q5JTB6 97 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 NKAPLQ5M9Q1 402 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 MINOS1Q5TGZ0 78 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 Q6ZNX1 250 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 RTN4RL2Q86UN3 420 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 C11orf44Q8N8P7 122 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 TMEM229BQ8NBD8 167 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 OR4C13Q8NGP0 309 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 ARHGAP5-AS1Q96IT6 56 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 KIRREL1Q96J84 757 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 CITED1Q99966 193 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 RAB18Q9NP72 206 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 IDI2-AS1Q9NZ38 188 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 DPM3Q9P2X0 92 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 KLK11Q9UBX7 282 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 TCF19Q9Y242 345 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 MINOS1-NBL1R4GNA1 71 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 PKD1L1Q8TDX9 2849 aa6.66□□□□□ -1.34
HDAC6-221ENST00000477561 CMYA5Q8N3K9 4069 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 A0A1W2PPE3 182 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 LEUTXA8MZ59 168 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 MCRIP1C9JLW8 97 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 BUB1B-PAK6H3BSN5 160 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 IGLV1-47P01700 117 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 AKAIN1P0CW23 69 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 VSIG10L2P0DP72 767 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 TBPP20226 339 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 CHATP28329 748 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 CD34P28906 385 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 SSTR5P35346 364 aa6.65□□□□□ -1.34
HDAC6-221ENST00000477561 KIR2DS4P43632 304 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms