RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TOLLIPQ9H0E2 274 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 PARP12Q9H0J9 701 aaKnown RBP13.2□□□□□ -0.3
VHL-203ENST00000477538 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 MAST4O15021 2626 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 CENPVL3A0A0U1RRI6 287 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 A0A1W2PPE3 182 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 TOR1AO14656 332 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 UPK1BO75841 260 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 IFNA6P05013 189 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 FCGR2CP31995 323 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 FAUP35544 74 aaKnown RBP13.19□□□□□ -0.3
VHL-203ENST00000477538 UBE2E1P51965 193 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 TSPAN5P62079 268 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 GPR157Q5UAW9 335 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 FAAP20Q6NZ36 180 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 CLEC9AQ6UXN8 241 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 ZNF439Q8NDP4 499 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 OR2AK2Q8NG84 335 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 EDARADDQ8WWZ3 215 aa13.19□□□□□ -0.3
VHL-203ENST00000477538 NAV3Q8IVL0 2385 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 HIVEP2P31629 2446 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 LINC00854A0A1B0GVQ3 168 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 A0A1W2PRD5 423 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 A0A1W2PRF3 423 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 A0A1W2PRM7 423 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 J3QR06 171 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 SLC31A2O15432 143 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 TUSC2O75896 110 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 AMY2AP04746 511 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 ARG1P05089 322 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 IGHV4-38-2P0DP08 117 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 ZNF134P52741 427 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 PRRX1P54821 245 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 CT45A1Q5HYN5 189 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 KLF17Q5JT82 389 aaPredicted RBP13.18□□□□□ -0.3
VHL-203ENST00000477538 ZNF626Q68DY1 528 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 SLC25A48Q6ZT89 311 aaKnown RBP13.18□□□□□ -0.3
VHL-203ENST00000477538 ARRDC1Q8N5I2 433 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 LINC00311Q8N616 119 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 C8orf31Q8N9H6 132 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 CT45A3Q8NHU0 189 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 ZNF596Q8TC21 504 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 GIMAP1Q8WWP7 306 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 DEDD2Q8WXF8 326 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 SLC6A7Q99884 636 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 ZNF2Q9BSG1 426 aaPredicted RBP13.18□□□□□ -0.3
VHL-203ENST00000477538 ABHD14AQ9BUJ0 271 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 C11orf54Q9H0W9 315 aaPredicted RBP13.18□□□□□ -0.3
VHL-203ENST00000477538 HRASLSQ9HDD0 168 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 ZNRD1Q9P1U0 126 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 OR2W1Q9Y3N9 320 aa13.18□□□□□ -0.3
VHL-203ENST00000477538 IGHV3OR16-10A0A075B7F0 116 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 ODF3BA8MYP8 253 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 ITGB1BP1O14713 200 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 IGLV1-47P01700 117 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 ZNF735P0CB33 412 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 AADACP22760 399 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 RAB7AP51149 207 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 HLA-DRB5Q30154 266 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 ZNF660Q6AZW8 331 aaPredicted RBP13.17□□□□□ -0.3
VHL-203ENST00000477538 DHRS11Q6UWP2 260 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 TMEM17Q86X19 198 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 BEND2Q8NDZ0 799 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 OR10X1Q8NGY0 326 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 OR6F1Q8NGZ6 308 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 OR56B4Q8NH76 319 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 BORCS5Q969J3 196 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 MMP28Q9H239 520 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 MCUBQ9NWR8 336 aa13.17□□□□□ -0.3
VHL-203ENST00000477538 RBM7Q9Y580 266 aaKnown RBP13.17□□□□□ -0.3
VHL-203ENST00000477538 FSHBP01225 129 aa13.16□□□□□ -0.3
VHL-203ENST00000477538 PPYP01298 95 aa13.16□□□□□ -0.3
VHL-203ENST00000477538 HERV-K104P61576 105 aa13.16□□□□□ -0.3
VHL-203ENST00000477538 RUSC1-AS1Q66K80 236 aa13.16□□□□□ -0.3
VHL-203ENST00000477538 OR4P4Q8NGL7 312 aa13.16□□□□□ -0.3
VHL-203ENST00000477538 GSX1Q9H4S2 264 aaPredicted RBP13.16□□□□□ -0.3
VHL-203ENST00000477538 TMEM160Q9NX00 188 aa13.16□□□□□ -0.3
VHL-203ENST00000477538 AMMECR1Q9Y4X0 333 aaPredicted RBP13.16□□□□□ -0.3
VHL-203ENST00000477538 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 CENPXA8MT69 81 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 NPFFO15130 113 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 OR8U9P0C7N5 309 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 IGKV1-13P0DP09 117 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 HNF1AP20823 631 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 LUMP51884 338 aaPredicted RBP13.15□□□□□ -0.3
VHL-203ENST00000477538 LGALS4P56470 323 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 FXYD4P59646 89 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 IFITM3Q01628 133 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 SCGB2B2Q4G0G5 96 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 MIDNQ504T8 468 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 C16orf87Q6PH81 154 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 BRD3OSQ6XYD6 125 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms