RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 NCMAPQ5T1S8 102 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 SLC16A13Q7RTY0 426 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 GGNQ86UU5 652 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 LEAP2Q969E1 77 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 CXXC4Q9H2H0 198 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 Q9N2K0 584 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 SEMA5BQ9P283 1151 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 FAM208BQ5VWN6 2430 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 SNRPCP09234 159 aaKnown RBP9.43□□□□□ -0.9
COL27A1-204ENST00000477421 HGFACQ04756 655 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 RBPJQ06330 500 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 NCR3LG1Q68D85 454 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 DHRS11Q6UWP2 260 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 C1orf87Q8N0U7 546 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 BMPERQ8N8U9 685 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 OR4A4PQ8NGN8 299 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 KLF14Q8TD94 323 aaPredicted RBP9.43□□□□□ -0.9
COL27A1-204ENST00000477421 ACY3Q96HD9 319 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 GUCD1Q96NT3 240 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 RARRES2Q99969 163 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 TM2D1Q9BX74 207 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 EGLN1Q9GZT9 426 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 MYOZ1Q9NP98 299 aaPredicted RBP9.43□□□□□ -0.9
COL27A1-204ENST00000477421 NKX6-3A6NJ46 265 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 RPS23P62266 143 aaKnown RBP9.43□□□□□ -0.9
COL27A1-204ENST00000477421 GNB1P62873 340 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 TNFAIP6P98066 277 aaPredicted RBP9.43□□□□□ -0.9
COL27A1-204ENST00000477421 VWA1Q6PCB0 445 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 MSI2Q96DH6 328 aaKnown RBP9.43□□□□□ -0.9
COL27A1-204ENST00000477421 COMMD5Q9GZQ3 224 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 NGBQ9NPG2 151 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 PARP11Q9NR21 331 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 FOXD3Q9UJU5 478 aaPredicted RBP9.43□□□□□ -0.9
COL27A1-204ENST00000477421 ACACBO00763 2458 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 IGKV1D-13A0A0B4J2D9 117 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 LY6G6EA0A0G2JKS1 128 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 IGKV1-13P0DP09 117 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 SULT1A1P50225 295 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 IL24Q13007 206 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 C22orf15Q8WYQ4 148 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 ATP5SQ99766 215 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 U3KQA8 63 aa9.43□□□□□ -0.9
COL27A1-204ENST00000477421 MDFIC2A0A1B0GVS7 189 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF891A8MT65 544 aaPredicted RBP9.42□□□□□ -0.9
COL27A1-204ENST00000477421 A8MXE2 369 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 A8MXK9 166 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 HBZP02008 142 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 CD200P41217 278 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 GLIPR1P48060 266 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 LHX2P50458 406 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 COL10A1Q03692 680 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 HES1Q14469 280 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 BHLHA15Q7RTS1 189 aaPredicted RBP9.42□□□□□ -0.9
COL27A1-204ENST00000477421 CYB561D1Q8N8Q1 229 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 CIB3Q96Q77 187 aaPredicted RBP9.42□□□□□ -0.9
COL27A1-204ENST00000477421 LRFN3Q9BTN0 628 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 OTOGLQ3ZCN5 2332 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 CLDN18P56856 261 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 SSX2Q16385 188 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 TMEM41BQ5BJD5 291 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 FAM89BQ8N5H3 189 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 RBMXL3Q8N7X1 1067 aaKnown RBP9.42□□□□□ -0.9
COL27A1-204ENST00000477421 DTD1Q8TEA8 209 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 TMEM37Q8WXS4 190 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
COL27A1-204ENST00000477421 WBP1Q96G27 269 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF665Q9H7R5 613 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF737O75373 536 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 SRSF10O75494 262 aaKnown RBP9.42□□□□□ -0.9
COL27A1-204ENST00000477421 OR5G3P0C626 314 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 SSTR5P35346 364 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 CHRNA7P36544 502 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 INO80CQ6PI98 192 aaPredicted RBP9.42□□□□□ -0.9
COL27A1-204ENST00000477421 OR10G4Q8NGN3 311 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 OR10G9Q8NGN4 311 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 OR10G7Q8NGN6 311 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 RND1Q92730 232 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 UHRF2Q96PU4 802 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 TMEM204Q9BSN7 226 aa9.42□□□□□ -0.9
COL27A1-204ENST00000477421 H3BQ15 152 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 DVL1O14640 695 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 SPINK4O60575 86 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 APOA2P02652 100 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 CCL1P22362 96 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 CRYGSP22914 178 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 MDH2P40926 338 aaKnown RBP9.41□□□□□ -0.9
COL27A1-204ENST00000477421 FAM201AQ5SY85 155 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 KCNIP4Q6PIL6 250 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 FGFRL1Q8N441 504 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 COMMD1Q8N668 190 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 OR13D1Q8NGV5 346 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 R3HDM4Q96D70 268 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 TAAR6Q96RI8 345 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 DCTN5Q9BTE1 182 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 APELAP0DMC3 54 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 QRFPP83859 136 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 SRSF6Q13247 344 aaKnown RBP9.41□□□□□ -0.9
COL27A1-204ENST00000477421 ACOT6Q3I5F7 207 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms