RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RALYQ9UKM9 306 aaKnown RBP16.16■□□□□ 0.18
VARS2-209ENST00000477288 KLF9Q13886 244 aaPredicted RBP16.16■□□□□ 0.18
VARS2-209ENST00000477288 GABRA6Q16445 453 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 MOB4Q9Y3A3 225 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 CACNA1CQ13936 2221 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 IGKV3OR2-268A0A0C4DH90 116 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 H3BQ15 152 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 MEOX2P50222 304 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 NUBP1P53384 320 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 ZNF343Q6P1L6 599 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 CISD1Q9NZ45 108 aaKnown RBP16.16■□□□□ 0.18
VARS2-209ENST00000477288 A0A1W2PPV9 198 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 UPK3AO75631 287 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 OR10J1P30954 320 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 FAM53AQ6NSI3 398 aaPredicted RBP16.15■□□□□ 0.18
VARS2-209ENST00000477288 PIMREGQ9BSJ6 248 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 MARVELD1Q9BSK0 173 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 IGHV4-34P06331 123 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 PET117Q6UWS5 81 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 DTX4Q9Y2E6 619 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 MARF1Q9Y4F3 1742 aaKnown RBP16.15■□□□□ 0.18
VARS2-209ENST00000477288 A0A1B0GU03 582 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 RAB29O14966 203 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 CD74P04233 296 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 OR2V2Q96R30 315 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 UQCRFS1P47985 274 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 OVCH2Q7RTZ1 564 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 MRGPRGQ86SM5 289 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 DDB2Q92466 427 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 ASCC3Q8N3C0 2202 aaKnown RBP16.15■□□□□ 0.18
VARS2-209ENST00000477288 A0A1W2PQF6 199 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 B4DEV8 164 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 GFRA3O60609 400 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 CA2P00918 260 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 CD81P60033 236 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 OR4A5Q8NH83 315 aa16.15■□□□□ 0.18
VARS2-209ENST00000477288 SIAH2O43255 324 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 PEBP1P30086 187 aaKnown RBP16.14■□□□□ 0.17
VARS2-209ENST00000477288 ZBTB34Q8NCN2 500 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 MRPL30Q8TCC3 161 aaKnown RBP16.14■□□□□ 0.17
VARS2-209ENST00000477288 NEURL2Q9BR09 285 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 METTL1Q9UBP6 276 aaKnown RBP16.14■□□□□ 0.17
VARS2-209ENST00000477288 GAPDHP04406 335 aaKnown RBP16.14■□□□□ 0.17
VARS2-209ENST00000477288 MMP9P14780 707 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 UCP2P55851 309 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 MCM3APO60318 1980 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 ZNF383Q8NA42 475 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 CHST5Q9GZS9 411 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 COL4A1P02462 1669 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 IGHV1-45A0A0A0MS14 117 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 HCP5Q6MZN7 132 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 OR4B1Q8NGF8 309 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 RAB24Q969Q5 203 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 ST6GAL2Q96JF0 529 aa16.14■□□□□ 0.17
VARS2-209ENST00000477288 TMEM218A2RU14 115 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 NPIPB6E9PJ23 425 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 FOXS1O43638 330 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 PLAUP00749 431 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 CD99P14209 185 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 FAM74A3Q4VXF1 159 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 TMEM52Q8NDY8 209 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 RNF133Q8WVZ7 376 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 TIMP4Q99727 224 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 C7orf77A4D0Y5 90 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 CEACAM18A8MTB9 384 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 RPLP1P05386 114 aaKnown RBP16.13■□□□□ 0.17
VARS2-209ENST00000477288 HOXD4P09016 255 aaPredicted RBP16.13■□□□□ 0.17
VARS2-209ENST00000477288 FAM214BQ7L5A3 538 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 GPA33Q99795 319 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 A0A0J9YW62 118 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 CTXND1A0A1B0GTU2 59 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 CTDSPLO15194 276 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 LOC107984156A0A0G2JMH3 177 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 PLPPR5Q32ZL2 321 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 ARL17AQ8IVW1 177 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 CFHR5Q9BXR6 569 aa16.13■□□□□ 0.17
VARS2-209ENST00000477288 CA11O75493 328 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 RPL27AP46776 148 aaKnown RBP16.12■□□□□ 0.17
VARS2-209ENST00000477288 SPRED2Q7Z698 418 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 ZNF501Q96CX3 271 aaPredicted RBP16.12■□□□□ 0.17
VARS2-209ENST00000477288 TRAV8-7A0A075B6U6 113 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 CXCL3P19876 107 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 LY6EQ16553 131 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 SHISA5Q8N114 240 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 ITLN1Q8WWA0 313 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 COL5A3P25940 1745 aaPredicted RBP16.12■□□□□ 0.17
VARS2-209ENST00000477288 DIRC3C9JPN6 131 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 SLC25A53Q5H9E4 307 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 TEX29Q8N6K0 151 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 IL36RNQ9UBH0 155 aa16.12■□□□□ 0.17
VARS2-209ENST00000477288 C1QAP02745 245 aa16.11■□□□□ 0.17
VARS2-209ENST00000477288 VSIG8P0DPA2 414 aa16.11■□□□□ 0.17
VARS2-209ENST00000477288 MDKP21741 143 aaPredicted RBP16.11■□□□□ 0.17
VARS2-209ENST00000477288 SMAD7O15105 426 aaKnown RBP16.11■□□□□ 0.17
VARS2-209ENST00000477288 IL11P20809 199 aa16.11■□□□□ 0.17
VARS2-209ENST00000477288 MFAP2P55001 183 aa16.11■□□□□ 0.17
VARS2-209ENST00000477288 ABHD14BQ96IU4 210 aa16.11■□□□□ 0.17
VARS2-209ENST00000477288 WDR25Q64LD2 544 aaPredicted RBP16.11■□□□□ 0.17
VARS2-209ENST00000477288 GPR61Q9BZJ8 451 aa16.11■□□□□ 0.17
VARS2-209ENST00000477288 RBM11P57052 281 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms