RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 Q6ZSV7 163 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 TMEM219Q86XT9 240 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF439Q8NDP4 499 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 OR52L2PQ8NGH6 319 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 OR56B1Q8NGI3 324 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 OR10R2Q8NGX6 335 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 OR5R1Q8NH85 324 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 SETD6Q8TBK2 473 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 RBMXL1Q96E39 390 aaKnown RBP7.8□□□□□ -1.16
HDAC3-208ENST00000476739 ATG5Q9H1Y0 275 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 CHMP1AQ9HD42 196 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-208ENST00000476739 AKIP1Q9NQ31 210 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 TRBV6-6A0A0A6YYG2 114 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 A6NDX4 124 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 BTBD17A6NE02 478 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 MFNGO00587 321 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 SPINT2O43291 252 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 CRYBA1P05813 215 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 RAG2P55895 527 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 VBP1P61758 197 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 S100A12P80511 92 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 IFITM2Q01629 132 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 CDK10Q15131 360 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 HMGN3Q15651 99 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 TIMM50Q3ZCQ8 353 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 MORN2Q502X0 79 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 CT45A1Q5HYN5 189 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 SLC16A12Q6ZSM3 486 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF767PQ75MW2 155 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 OR52M1Q8NGK5 317 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 CT45A3Q8NHU0 189 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 PTX4Q96A99 478 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 SLC25A38Q96DW6 304 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 RAB3CQ96E17 227 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 C12orf4Q9NQ89 552 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 OR2S2Q9NQN1 319 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 KCNIP1Q9NZI2 227 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 GNG12Q9UBI6 72 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 TCF19Q9Y242 345 aa7.79□□□□□ -1.16
HDAC3-208ENST00000476739 A0A1W2PPI3 338 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 NDUFA7O95182 113 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 SCTP09683 121 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 PPP1CCP36873 323 aaKnown RBP7.78□□□□□ -1.16
HDAC3-208ENST00000476739 REG1BP48304 166 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 DYNLT3P51808 116 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF45Q02386 682 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 FOXL1Q12952 345 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 DHRS7BQ6IAN0 325 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-208ENST00000476739 TRAT1Q6PIZ9 186 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 SLC25A48Q6ZT89 311 aaKnown RBP7.78□□□□□ -1.16
HDAC3-208ENST00000476739 LINC00311Q8N616 119 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 OR10X1Q8NGY0 326 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 MAFIPQ8WZ33 124 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 TOMM40LQ969M1 308 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 CMSS1Q9BQ75 279 aaKnown RBP7.78□□□□□ -1.16
HDAC3-208ENST00000476739 Q9N2K0 584 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 ABCB10Q9NRK6 738 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF230Q9UIE0 474 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-208ENST00000476739 TMA7Q9Y2S6 64 aaKnown RBP7.78□□□□□ -1.16
HDAC3-208ENST00000476739 SIGLEC9Q9Y336 463 aa7.78□□□□□ -1.16
HDAC3-208ENST00000476739 IGKV1D-8A0A087WSZ0 117 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 IGKV1-6A0A0C4DH72 117 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 METTL21EPA6NDL7 271 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 TIMM23O14925 209 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 CCNKO75909 580 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 HIST1H1DP16402 221 aaKnown RBP7.77□□□□□ -1.17
HDAC3-208ENST00000476739 CEACAM3P40198 252 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 KRTAP10-3P60369 221 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 RPL15P61313 204 aaKnown RBP7.77□□□□□ -1.17
HDAC3-208ENST00000476739 B2MP61769 119 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 HLA-DRB3P79483 266 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 MRPS15P82914 257 aaKnown RBP7.77□□□□□ -1.17
HDAC3-208ENST00000476739 HTD2P86397 168 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 SRSF4Q08170 494 aaKnown RBP7.77□□□□□ -1.17
HDAC3-208ENST00000476739 MADCAM1Q13477 382 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 CTF1Q16619 201 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 Q6ZS46 218 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 ODF3L1Q8IXM7 274 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 DRAM1Q8N682 238 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 LINC01006Q8NI28 216 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 IL1F10Q8WWZ1 152 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 CFHR4Q92496 578 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 ST6GALNAC6Q969X2 333 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 RPEQ96AT9 228 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 CREB3L1Q96BA8 519 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 GALMQ96C23 342 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 PARP12Q9H0J9 701 aaKnown RBP7.77□□□□□ -1.17
HDAC3-208ENST00000476739 RIMS4Q9H426 269 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-208ENST00000476739 OR1A1Q9P1Q5 309 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 JPT1Q9UK76 154 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 STAB1Q9NY15 2570 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 ANK2Q01484 3957 aa7.77□□□□□ -1.17
HDAC3-208ENST00000476739 CLPSL1A2RUU4 121 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 FAM90A9PA6NNJ1 464 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF736B4DX44 427 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-208ENST00000476739 J3QRK9 145 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 HSD17B6O14756 317 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 ST8SIA5O15466 376 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 YPEL1O60688 119 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms