RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ZNF833PQ6ZTB9 187 aa12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 ZDHHC13Q8IUH4 622 aa12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 DDB2Q92466 427 aa12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 FAM103A1Q9BTL3 118 aaKnown RBP12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 GABARAPL3Q9BY60 117 aa12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 RANGRFQ9HD47 186 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 ETAA1Q9NY74 926 aa12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 GAB2Q9UQC2 676 aa12.51□□□□□ -0.41
APOBEC3F-203ENST00000476513 SHISA3A0PJX4 238 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 TRGV3P03979 118 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 PPP1CCP36873 323 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 SOX2P48431 317 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 GAPTQ8N292 157 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 OR52L2PQ8NGH6 319 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 JAM3Q9BX67 310 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 ISG20L2Q9H9L3 353 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 PLEKHA3Q9HB20 300 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 TAF9BQ9HBM6 251 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 RCC2Q9P258 522 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 POMPQ9Y244 141 aa12.5□□□□□ -0.41
APOBEC3F-203ENST00000476513 IZUMO1RA6ND01 250 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 MCRIP1C9JLW8 97 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 BRI3O95415 125 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 CD40LGP29965 261 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 GYS2P54840 703 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 SYNJ2BPP57105 145 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 PLGLAQ15195 96 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 LCN12Q6JVE5 192 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 FAM131AQ6UXB0 335 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 C5orf24Q7Z6I8 188 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 LHFPL3Q86UP9 236 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 SYS1Q8N2H4 156 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 LFNGQ8NES3 379 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 RGP1Q92546 391 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 RDH12Q96NR8 316 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 S100A13Q99584 98 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 ALG8Q9BVK2 526 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 SPACA1Q9HBV2 294 aa12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 PAK1IP1Q9NWT1 392 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 EXOGQ9Y2C4 368 aaKnown RBP12.49□□□□□ -0.41
APOBEC3F-203ENST00000476513 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 ANKRD34BA5PLL1 514 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 TFAP2AP05549 437 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 GTF2F2P13984 249 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 ZNF93P35789 620 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 SLC22A6Q4U2R8 563 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 DDI2Q5TDH0 399 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 Q8N402 240 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 TRUB1Q8WWH5 349 aaKnown RBP12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 MRPL48Q96GC5 212 aaKnown RBP12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 JPT1Q9UK76 154 aa12.48□□□□□ -0.41
APOBEC3F-203ENST00000476513 ZNF780AO75290 641 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 FADS2O95864 444 aaKnown RBP12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 CSN3P07498 182 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 SNRPBP14678 240 aaKnown RBP12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 RAB12Q6IQ22 244 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 TMEM106AQ96A25 262 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 LGALS12Q96DT0 336 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 MRPS24Q96EL2 167 aaKnown RBP12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 CYYR1Q96J86 154 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 CLCC1Q96S66 551 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 TMEM138Q9NPI0 162 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 IMPAD1Q9NX62 359 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 SIGLEC8Q9NYZ4 499 aa12.47□□□□□ -0.41
APOBEC3F-203ENST00000476513 C13orf42A0A1B0GVH6 325 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 YPEL1O60688 119 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 SLC25A30Q5SVS4 291 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 ZNF562Q6V9R5 426 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 YPEL2Q96QA6 119 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 IFI27L2Q9H2X8 130 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 ZNF355PQ9NSJ1 428 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 MBNL3Q9NUK0 354 aaKnown RBP12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 ADAM30Q9UKF2 790 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 PEX16Q9Y5Y5 336 aa12.46□□□□□ -0.41
APOBEC3F-203ENST00000476513 CA11O75493 328 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 SC5DO75845 299 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 TPPPO94811 219 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 MAS1P04201 325 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 CD2P06729 351 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 CT45A6P0DMU7 189 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 CT45A5P0DMU8 189 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 CT45A7P0DMV0 189 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 FSTP19883 344 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 FASP25445 335 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 BDKRB2P30411 391 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 MECP2P51608 486 aaKnown RBP12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 CD81P60033 236 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 SNRPGP62308 76 aaKnown RBP12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 PPP3R1P63098 170 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 HTD2P86397 168 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 MRPL28Q13084 256 aaKnown RBP12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 MOGAT2Q3SYC2 334 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 MEDAGQ5VYS4 303 aa12.45□□□□□ -0.42
APOBEC3F-203ENST00000476513 GLDNQ6ZMI3 551 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms