RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ZNF503-AS2A6NEH8 195 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF716A6NP11 495 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 PNRC1Q12796 327 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 TMEM241Q24JQ0 296 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 OR10J5Q8NHC4 309 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 GPR35Q9HC97 309 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 TRAPPC2LH3BP13 241 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 CLDN1O95832 211 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 UMODP07911 640 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 SSR4P51571 173 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 CLDN15P56746 228 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 ACSM6Q6P461 480 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF705AQ6ZN79 300 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 RPS19BP1Q86WX3 136 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 CLDN23Q96B33 292 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 IL17BQ9UHF5 180 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 CLEC18AA5D8T8 446 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 PGPEP1LA6NFU8 196 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 A6NNC1 897 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 RHBDL1O75783 438 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 CRYAAP02489 173 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 CCL4P13236 92 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 SPATA46Q5T0L3 261 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 CLEC18CQ8NCF0 446 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 MRPL30Q8TCC3 161 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 PARLQ9H300 379 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 SRD5A3Q9H8P0 318 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 ASPMQ8IZT6 3477 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 KNTC1P50748 2209 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 TRAV1-1A0A0B4J248 108 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 IGFBP4P22692 258 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 NUBP1P53384 320 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 RAC3P60763 192 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 FGF12P61328 243 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 SLC10A1Q14973 349 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 CARFQ8N187 725 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 OR51G1Q8NGK1 321 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 PSMF1Q92530 271 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 ADGRG7Q96K78 797 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 OR2W1Q9Y3N9 320 aa11.65□□□□□ -0.54
SEMA4D-217ENST00000475255 SELEP16581 610 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 SPCS3P61009 180 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 ARF1P84077 181 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 MEF2BQ02080 365 aaPredicted RBP11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 MRPL21Q7Z2W9 205 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 MRGPRGQ86SM5 289 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 GGNQ86UU5 652 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 OR5R1Q8NH85 324 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 CPT1CQ8TCG5 803 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 OR5P3Q8WZ94 311 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 KIR2DS1A0A191URI9 304 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 KIR2DS4P43632 304 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 LINC00205P59089 165 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 UBE2G2P60604 165 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 PAX5Q02548 391 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 FOXO1Q12778 655 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 KIR2DS1Q14954 304 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 MRPL14Q6P1L8 145 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 TEX38Q6PEX7 206 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 MKXQ8IYA7 352 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 MBD3L1Q8WWY6 194 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 RAB40CQ96S21 281 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 NDUFAF3Q9BU61 184 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 CLN8Q9UBY8 286 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 NAT8Q9UHE5 227 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 KIAA1549Q9HCM3 1950 aa11.64□□□□□ -0.55
SEMA4D-217ENST00000475255 IGHV1-45A0A0A0MS14 117 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 TRAV24A0A0B4J272 114 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 SIRPB1O00241 398 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 SLC38A11Q08AI6 406 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 LRRC75BQ2VPJ9 315 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 ARL6IP6Q8N6S5 226 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 C2orf88Q9BSF0 95 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 CEP192Q8TEP8 1941 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 DVL1O14640 695 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 NUPR1O60356 82 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 PAGE4O60829 102 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 KRASP01116 189 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 COX6A1P12074 109 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 B3GALT5-AS1P59052 145 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 TMEM41BQ5BJD5 291 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 TMEM256Q8N2U0 113 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 TAF15Q92804 592 aaKnown RBP eCLIP11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 IL22RA2Q969J5 263 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 SNHG12Q9BXW3 62 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 CBR3O75828 277 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 IGLV2-14P01704 120 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 BTNL3Q6UXE8 466 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 ZNF808Q8N4W9 903 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-217ENST00000475255 CADM4Q8NFZ8 388 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms