RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SMIM19Q96E16 107 aa10.87□□□□□ -0.67
CCDC78-209ENST00000474647 ALX4Q9H161 411 aaPredicted RBP10.87□□□□□ -0.67
CCDC78-209ENST00000474647 IFT22Q9H7X7 185 aa10.87□□□□□ -0.67
CCDC78-209ENST00000474647 LCE6AA0A183 80 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 C12orf77C9JDV5 145 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 SPINT2O43291 252 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 CD2P06729 351 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 GP9P14770 177 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF93P35789 620 aaPredicted RBP10.86□□□□□ -0.67
CCDC78-209ENST00000474647 SLURP1P55000 103 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 PPP3R1P63098 170 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 LSAMPQ13449 338 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 SRSF7Q16629 238 aaKnown RBP eCLIP10.86□□□□□ -0.67
CCDC78-209ENST00000474647 MPV17LQ2QL34 196 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 NHLRC3Q5JS37 347 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF529Q6P280 563 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 ASCL4Q6XD76 172 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 LINC00596Q86U02 117 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF439Q8NDP4 499 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 RGP1Q92546 391 aaPredicted RBP10.86□□□□□ -0.67
CCDC78-209ENST00000474647 PGLYRP3Q96LB9 341 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 MGLLQ99685 303 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 MRPS26Q9BYN8 205 aaKnown RBP10.86□□□□□ -0.67
CCDC78-209ENST00000474647 VCX3AQ9NNX9 186 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF580Q9UK33 172 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 TRAPPC2LQ9UL33 140 aa10.86□□□□□ -0.67
CCDC78-209ENST00000474647 TRAV41A0A0B4J266 112 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 A0A1W2PP11 408 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 CD1AP06126 327 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 HSMCR30P0CW71 290 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 CNTFRP26992 372 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF134P52741 427 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF137PP52743 207 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 RUNX1Q01196 453 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 KIAA0141Q14154 515 aaPredicted RBP10.85□□□□□ -0.67
CCDC78-209ENST00000474647 NEDD8Q15843 81 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 ECSCRQ19T08 205 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 Q3ZCU0 254 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 SLC22A6Q4U2R8 563 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 CT45A1Q5HYN5 189 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 SYT6Q5T7P8 510 aaPredicted RBP10.85□□□□□ -0.67
CCDC78-209ENST00000474647 ZFP41Q8N8Y5 198 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 OR4K15Q8NH41 348 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 CT45A3Q8NHU0 189 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 UFD1Q92890 307 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 DLX4Q92988 240 aaPredicted RBP10.85□□□□□ -0.67
CCDC78-209ENST00000474647 MUL1Q969V5 352 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 TMEM106AQ96A25 262 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 CHCHD6Q9BRQ6 235 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 OR51J1Q9H342 316 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 RAB9BQ9NP90 201 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 IL36GQ9NZH8 169 aa10.85□□□□□ -0.67
CCDC78-209ENST00000474647 DNAH1Q9P2D7 4330 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 HBZP02008 142 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 MT-ND4P03905 459 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 CPEP16870 476 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 CELP19835 753 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 PSMB9P28065 219 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 BLVRBP30043 206 aaPredicted RBP10.84□□□□□ -0.67
CCDC78-209ENST00000474647 RAB9AP51151 201 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 ACTBP60709 375 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 TPBGQ13641 420 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 C6orf183Q5T699 404 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 OR6Q1Q8NGQ2 317 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 OR1L1Q8NH94 360 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 GPR148Q8TDV2 347 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 CASTOR1Q8WTX7 329 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 ORAI1Q96D31 301 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 ZNF251Q9BRH9 671 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 GHITMQ9H3K2 345 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 TMEM138Q9NPI0 162 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 ETAA1Q9NY74 926 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 BIRC6Q9NR09 4857 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 TNCP24821 2201 aa10.84□□□□□ -0.67
CCDC78-209ENST00000474647 PNMA8CA0A1B0GUJ8 204 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 A0A1W2PN81 502 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 MCRIP1C9JLW8 97 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 LINC01619G3V211 115 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 LANCL1O43813 399 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 IGLV1-40P01703 118 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 HLA-DRB1P01911 266 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 GTF2F2P13984 249 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 BDKRB2P30411 391 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 CHRNA7P36544 502 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 LIPKQ5VXJ0 399 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 ARPC1AQ92747 370 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 GHSRQ92847 366 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 CITED4Q96RK1 184 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 MRPL20Q9BYC9 149 aaKnown RBP10.83□□□□□ -0.68
CCDC78-209ENST00000474647 OR2S2Q9NQN1 319 aa10.83□□□□□ -0.68
CCDC78-209ENST00000474647 IGHV4OR15-8A0A075B7B6 117 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 A0A087WW49 117 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 IGHV7-81A0A0B4J1V7 117 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 NBR2O15453 112 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 ZNF780AO75290 641 aaPredicted RBP10.82□□□□□ -0.68
CCDC78-209ENST00000474647 RCC1P18754 421 aaPredicted RBP10.82□□□□□ -0.68
CCDC78-209ENST00000474647 PITPNAQ00169 270 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 GNMTQ14749 295 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms