RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TMEM218A2RU14 115 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 DPRXA6NFQ7 191 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 B8ZZF3 427 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 K7N7A8 449 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 F2RL2O00254 374 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 ITGB1BP1O14713 200 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 SSSCA1O60232 199 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 MED6O75586 246 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 SCO1O75880 301 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 DANCRP0C864 163 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 SSTR5P35346 364 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 RAB5CP51148 216 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 UCNP55089 124 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 TMPRSS3P57727 454 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 VAMP2P63027 116 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 CATR1Q13166 79 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 ZNF266Q14584 549 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 TEX36Q5VZQ5 186 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 STUMQ69YW2 141 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 ZNF66Q6ZN08 573 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 Q6ZRM9 215 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 MOGAT3Q86VF5 341 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 SDSLQ96GA7 329 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 RAB40CQ96S21 281 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 DIRC2Q96SL1 478 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 AGMATQ9BSE5 352 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 OR2D2Q9H210 308 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 STRAPQ9Y3F4 350 aaKnown RBP8.18□□□□□ -1.1
USP39-214ENST00000474572 RBM7Q9Y580 266 aaKnown RBP8.18□□□□□ -1.1
USP39-214ENST00000474572 MMP24Q9Y5R2 645 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 WSB1Q9Y6I7 421 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 RAI1Q7Z5J4 1906 aaPredicted RBP8.18□□□□□ -1.1
USP39-214ENST00000474572 TANC2Q9HCD6 1990 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 PRR14LQ5THK1 2151 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 MUC6Q6W4X9 2439 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 CUL9Q8IWT3 2517 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 DSCAML1Q8TD84 2053 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 FAM186AA6NE01 2351 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 SPINT2O43291 252 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 TXNL1O43396 289 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 SPRY3O43610 288 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 CHST1O43916 411 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 YPEL1O60688 119 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 FBXO24O75426 580 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 GZMHP20718 246 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 CAV2P51636 162 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 F2RL1P55085 397 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 BRWD1-AS2P59051 145 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 TAS2R30P59541 319 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 SELENOVP59797 346 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 RPL30P62888 115 aaKnown RBP8.17□□□□□ -1.1
USP39-214ENST00000474572 TNFAIP6P98066 277 aaPredicted RBP8.17□□□□□ -1.1
USP39-214ENST00000474572 RBPJQ06330 500 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 SWI5Q1ZZU3 235 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 MIDNQ504T8 468 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 PRR30Q53SZ7 412 aaPredicted RBP8.17□□□□□ -1.1
USP39-214ENST00000474572 FAM209AQ5JX71 171 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 VHLLQ6RSH7 139 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 CLEC9AQ6UXN8 241 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 Q6ZRG5 221 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 SPAG16Q8N0X2 631 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 ZNF561Q8N587 486 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 TPRX1Q8N7U7 411 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 SUN5Q8TC36 379 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 EDARADDQ8WWZ3 215 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 NINJ1Q92982 152 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 C14orf79Q96F83 325 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 YPEL2Q96QA6 119 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 GCM1Q9NP62 436 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 RNF7Q9UBF6 113 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 CACNG5Q9UF02 275 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 CACFD1Q9UGQ2 172 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 GAB2Q9UQC2 676 aa8.17□□□□□ -1.1
USP39-214ENST00000474572 CARHSP1Q9Y2V2 147 aaKnown RBP8.17□□□□□ -1.1
USP39-214ENST00000474572 WRBO00258 174 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 TOR1AO14656 332 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 ABCD4O14678 606 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 RAB29O14966 203 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 SYNGR2O43760 224 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 GFRA3O60609 400 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 ADCYAP1P18509 176 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 TNFSF4P23510 183 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 CD80P33681 288 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 PPP1CCP36873 323 aaKnown RBP8.16□□□□□ -1.1
USP39-214ENST00000474572 AKR1C2P52895 323 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 LOXL3P58215 753 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 RPL23AP62750 156 aaKnown RBP8.16□□□□□ -1.1
USP39-214ENST00000474572 SP5Q6BEB4 398 aaPredicted RBP8.16□□□□□ -1.1
USP39-214ENST00000474572 FAM53AQ6NSI3 398 aaPredicted RBP8.16□□□□□ -1.1
USP39-214ENST00000474572 ZNF788Q6ZQV5 615 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 FGFRL1Q8N441 504 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 COMMD1Q8N668 190 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 HSD17B10Q99714 261 aaKnown RBP8.16□□□□□ -1.1
USP39-214ENST00000474572 VKORC1Q9BQB6 163 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 DCTN5Q9BTE1 182 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 MAGT1Q9H0U3 335 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 FAM234AQ9H0X4 552 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 HIPK2Q9H2X6 1198 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 OR6C3Q9NZP0 311 aa8.16□□□□□ -1.1
USP39-214ENST00000474572 LAMP3Q9UQV4 416 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms