RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 OR2AK2Q8NG84 335 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 HSPB9Q9BQS6 159 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 SULT4A1Q9BR01 284 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 ZNF107Q9UII5 783 aaPredicted RBP15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 LSM2Q9Y333 95 aaKnown RBP15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 WI2-2373I1.2A0A1W2PRP0 233 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 HTR2CP28335 458 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 KIR2DS1Q14954 304 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 MED22Q15528 200 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 HMGN3Q15651 99 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 OR6M1Q8NGM8 313 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 UFD1Q92890 307 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 RAX2Q96IS3 184 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 FAAP24Q9BTP7 215 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 TM2D1Q9BX74 207 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 STEAP1Q9UHE8 339 aa15.97■□□□□ 0.15
PDLIM4-206ENST00000474421 SLC22A1O15245 554 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 BPNT1O95861 308 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 UCHL1P09936 223 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 RAB25P57735 213 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 CFHR3Q02985 330 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 OR10K2Q6IF99 312 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 FAM71F2Q6NXP2 309 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 ZNF833PQ6ZTB9 187 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 MOB1BQ7L9L4 216 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 C6orf201Q7Z4U5 140 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 ODF3L1Q8IXM7 274 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 ZNF251Q9BRH9 671 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 MRPL20Q9BYC9 149 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 RIMS4Q9H426 269 aaPredicted RBP15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 CHMP1AQ9HD42 196 aaPredicted RBP15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 TPRKBQ9Y3C4 175 aa15.96■□□□□ 0.15
PDLIM4-206ENST00000474421 CD37P11049 281 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 SLC2A2P11168 524 aaPredicted RBP15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 MYF6P23409 242 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 ACTBP60709 375 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 TRAM1Q15629 374 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 OR5M8Q8NGP6 311 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 KCTD7Q96MP8 289 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 NABP2Q9BQ15 211 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 PLEKHJ1Q9NW61 149 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 PIPOXQ9P0Z9 390 aa15.95■□□□□ 0.14
PDLIM4-206ENST00000474421 TMEM14DPA8MWL7 114 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 NAPSAO96009 420 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 PSMB8P28062 276 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 BLVRBP30043 206 aaPredicted RBP15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 RANBP1P43487 201 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 DGCR2P98153 550 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 UNC119Q13432 240 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 IRF3Q14653 427 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 LIPKQ5VXJ0 399 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 LCNL1Q6ZST4 164 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 SVOPQ8N4V2 548 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 C4orf3Q8WVX3 66 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 IL1F10Q8WWZ1 152 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 DUX3Q96PT4 197 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 URM1Q9BTM9 101 aaKnown RBP15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 KIAA1456Q9P272 454 aa15.94■□□□□ 0.14
PDLIM4-206ENST00000474421 SAA2-SAA4A0A096LPE2 208 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 RAB29O14966 203 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 NBR2O15453 112 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 RAMP3O60896 148 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 HLA-DRB1P01911 266 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 SAA2P0DJI9 122 aaPredicted RBP15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 PSMA1P25786 263 aaKnown RBP15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 OR3A3P47888 321 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 QRFPP83859 136 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 ZNF880Q6PDB4 577 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 CYYR1Q96J86 154 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 NICN1Q9BSH3 213 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 GHITMQ9H3K2 345 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 PLGRKTQ9HBL7 147 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 SLC23A1Q9UHI7 598 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 MGAT4AQ9UM21 535 aa15.93■□□□□ 0.14
PDLIM4-206ENST00000474421 TRBV6-6A0A0A6YYG2 114 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 ARL6IP5O75915 188 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 ARSBP15848 533 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 TPBGQ13641 420 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 C5orf64Q2M2E5 130 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 DEFB136Q30KP8 78 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 VAX1Q5SQQ9 334 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 TMEM65Q6PI78 240 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 C5orf24Q7Z6I8 188 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 NPBQ8NG41 125 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 SETD6Q8TBK2 473 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 TMEM203Q969S6 136 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 IFI27L2Q9H2X8 130 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 OR51J1Q9H342 316 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 ISYNA1Q9NPH2 558 aa15.92■□□□□ 0.14
PDLIM4-206ENST00000474421 COL7A1Q02388 2944 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 SLC17A2O00624 439 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 ITGB1BP1O14713 200 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 RGS10O43665 173 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 HSMCR30P0CW71 290 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 CD69Q07108 199 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 C9orf66Q5T8R8 295 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 LIN54Q6MZP7 749 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 ANKRD60Q9BZ19 345 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 LPAR5Q9H1C0 372 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 KCNK15Q9H427 330 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms