RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 PSMB11A5LHX3 300 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 FOXI3A8MTJ6 420 aaPredicted RBP12.86□□□□□ -0.35
CPA4-205ENST00000474254 K7EIL1 84 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 LANCL1O43813 399 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 MOSP00540 346 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 IGHG2P01859 326 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 ZNF880Q6PDB4 577 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 MOB1BQ7L9L4 216 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 FAM89BQ8N5H3 189 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 Q8N9W7 124 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 DPF1Q92782 380 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 GALMQ96C23 342 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 LIN7CQ9NUP9 197 aaKnown RBP12.86□□□□□ -0.35
CPA4-205ENST00000474254 NDUFB11Q9NX14 153 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 LRRC42Q9Y546 428 aa12.86□□□□□ -0.35
CPA4-205ENST00000474254 KMT2CQ8NEZ4 4911 aaKnown RBP12.86□□□□□ -0.35
CPA4-205ENST00000474254 ZNF736B4DX44 427 aaPredicted RBP12.85□□□□□ -0.35
CPA4-205ENST00000474254 SOCS1O15524 211 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 YPEL1O60688 119 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 RGS11O94810 467 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 LSAMPQ13449 338 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 CD200R1LQ6Q8B3 271 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 SLC35E3Q7Z769 313 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 ODF3L1Q8IXM7 274 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 OR51D1Q8NGF3 324 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 OR8H1Q8NGG4 311 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 CHPT1Q8WUD6 406 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 NOL4LQ96MY1 436 aaPredicted RBP12.85□□□□□ -0.35
CPA4-205ENST00000474254 YPEL2Q96QA6 119 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 GPR61Q9BZJ8 451 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 CHMP1AQ9HD42 196 aaPredicted RBP12.85□□□□□ -0.35
CPA4-205ENST00000474254 PLSCR3Q9NRY6 295 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 PLEKHJ1Q9NW61 149 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 ABRACLQ9P1F3 81 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 HSF4Q9ULV5 492 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 V9GY05 133 aa12.85□□□□□ -0.35
CPA4-205ENST00000474254 DNAH9Q9NYC9 4486 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 NCBP2LA6PVI3 153 aaKnown RBP12.84□□□□□ -0.35
CPA4-205ENST00000474254 SERPINE3A8MV23 424 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 LDLRAD4O15165 306 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 MRPS14O60783 128 aaKnown RBP12.84□□□□□ -0.35
CPA4-205ENST00000474254 RANBP1P43487 201 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 PSMD7P51665 324 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 CLDN12P56749 244 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 FOXRED2Q8IWF2 684 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 FAM71E2Q8N5Q1 922 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 FAM3DQ96BQ1 224 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 RIMS4Q9H426 269 aaPredicted RBP12.84□□□□□ -0.35
CPA4-205ENST00000474254 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
CPA4-205ENST00000474254 SAA2-SAA4A0A096LPE2 208 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 SAA2P0DJI9 122 aaPredicted RBP12.83□□□□□ -0.36
CPA4-205ENST00000474254 GPR12P47775 334 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 ZNF833PQ6ZTB9 187 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 ZNF329Q86UD4 541 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 STPG2Q8N412 459 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 IL1F10Q8WWZ1 152 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 S1PR3Q99500 378 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.36
CPA4-205ENST00000474254 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.36
CPA4-205ENST00000474254 IFI27L2Q9H2X8 130 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 C12orf4Q9NQ89 552 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 STEAP1Q9UHE8 339 aa12.83□□□□□ -0.36
CPA4-205ENST00000474254 SHISA3A0PJX4 238 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 AP4M1O00189 453 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 GALP22466 123 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 VEGFCP49767 419 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 TMEM50BP56557 158 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 HLA-DRB3P79483 266 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 CD69Q07108 199 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 HES5Q5TA89 166 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 UBE2UQ5VVX9 321 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 C11orf87Q6NUJ2 197 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 FAM71F2Q6NXP2 309 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 OR56B1Q8NGI3 324 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 SETD6Q8TBK2 473 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 ARHGAP5-AS1Q96IT6 56 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 Q9H521 79 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 MGAT4AQ9UM21 535 aa12.82□□□□□ -0.36
CPA4-205ENST00000474254 NBEAL2Q6ZNJ1 2754 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 COL7A1Q02388 2944 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 TMEM272A0A1B0GTI8 110 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 TRDV1A0A1B0GX56 115 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 WI2-2373I1.2A0A1W2PRP0 233 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 PDCD5O14737 125 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 DENRO43583 198 aaKnown RBP12.81□□□□□ -0.36
CPA4-205ENST00000474254 MYL9P24844 172 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 HOXD3P31249 432 aaPredicted RBP12.81□□□□□ -0.36
CPA4-205ENST00000474254 OR3A3P47888 321 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 F2RL1P55085 397 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 OR10A3P58181 314 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
CPA4-205ENST00000474254 SLC35B1P78383 322 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 PLA2G7Q13093 441 aa12.81□□□□□ -0.36
CPA4-205ENST00000474254 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms