RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 CFHR1Q03591 330 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 NSDHLQ15738 373 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 VWC2Q2TAL6 325 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 COL5A1-AS1Q5SY13 56 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 WDR74Q6RFH5 385 aaPredicted RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 PARM1Q6UWI2 310 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 C17orf82Q86X59 251 aaPredicted RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 OR1K1Q8NGR3 316 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 ORAOV1Q8WV07 137 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 BADQ92934 168 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 PINX1Q96BK5 328 aaKnown RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 OR5B12Q96R08 314 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 PLK3Q9H4B4 646 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 SH2D1BO14796 132 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 SYNGR2O43760 224 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 HYPMO75409 117 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 IFNA5P01569 189 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 SHBQ15464 509 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 LHFPL2Q6ZUX7 228 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 GJC3Q8NFK1 279 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 OR2M7Q8NG81 312 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 OR1L6Q8NGR2 347 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 OR1L1Q8NH94 360 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 LHX4Q969G2 390 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 GOLGA4Q13439 2230 aaKnown RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 B4DGG1 531 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 SYNGR4O95473 234 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 IGLC2P0DOY2 106 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 IGLC3P0DOY3 106 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 PRO3102Q9H379 93 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 TRAV39A0A0B4J263 110 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 A0A1W2PR80 420 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 IAPPP10997 89 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 EGR1P18146 543 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 CD38P28907 300 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 ZNF41P51814 821 aaPredicted RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 PAFAH1B2P68402 229 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 KMT5CQ86Y97 462 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 BATF2Q8N1L9 274 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 SLC25A22Q9H936 323 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 TRBV11-1A0A0K0K1C0 115 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 K7EN84 100 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 Q0VG73 95 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 TMEM183BQ1AE95 376 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 CST9LP1Q5W188 147 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 HLA-DQA1Q5Y7H0 255 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 WDR5BQ86VZ2 330 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 SAXO1Q8IYX7 474 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 OR4F5Q8NH21 305 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 EXTL1Q92935 676 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 LSM10Q969L4 123 aaKnown RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 OR4F4Q96R69 305 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 HSPB9Q9BQS6 159 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 GSX1Q9H4S2 264 aaPredicted RBP3.98□□□□□ -1.77
U2SURP-208ENST00000473835 PDE4DIPQ5VU43 2346 aa3.98□□□□□ -1.77
U2SURP-208ENST00000473835 SHANK1Q9Y566 2161 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 ZNF705FA8MVS1 300 aaPredicted RBP3.97□□□□□ -1.77
U2SURP-208ENST00000473835 PAGE4O60829 102 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 MMP23AO75900 390 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 ZNF705DP0CH99 300 aaPredicted RBP3.97□□□□□ -1.77
U2SURP-208ENST00000473835 ZNF705BP0CI00 300 aaPredicted RBP3.97□□□□□ -1.77
U2SURP-208ENST00000473835 RHBDD2Q6NTF9 364 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FADS6Q8N9I5 356 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 OR2M3Q8NG83 312 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 VN1R17PQ8TDU5 208 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 TMEM9BQ9NQ34 198 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 PSENENQ9NZ42 101 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 CACNG5Q9UF02 275 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FER1L5A0AVI2 2057 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 CTXND1A0A1B0GTU2 59 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 IFNA1P01562 189 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 PPBPP02775 128 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 MPLP40238 635 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 RPS18P62269 152 aaKnown RBP3.97□□□□□ -1.77
U2SURP-208ENST00000473835 TFF3Q07654 80 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 HLA-DRB5Q30154 266 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 KRTCAP3Q53RY4 240 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 OR4F17Q8NGA8 305 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FGFBP3Q8TAT2 258 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 UBE2L5PA0A1B0GUS4 154 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 C3orf80F5H4A9 247 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 ATP5G3P48201 142 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
U2SURP-208ENST00000473835 BRWD1-AS2P59051 145 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 RAC1P63000 192 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 CCL7P80098 99 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 CNN3Q15417 329 aaKnown RBP3.97□□□□□ -1.77
U2SURP-208ENST00000473835 TESK1Q15569 626 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FAM27BQ5VT28 67 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 C5orf30Q96GV9 206 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 RCHY1Q96PM5 261 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 A0A0U1RQK1 487 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 ZNF320A2RRD8 509 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FAM90A10PA6NDY2 464 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FAM90A18PA6NE21 464 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FAM90A16PA6NEW6 464 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FAM90A20PA6NIJ5 464 aa3.97□□□□□ -1.77
U2SURP-208ENST00000473835 FAM90A8PA6NJQ4 464 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms