RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TMEM272A0A1B0GTI8 110 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 TRDV1A0A1B0GX56 115 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 METTL21EPA6NDL7 271 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 NUDT19A8MXV4 375 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 RRP9O43818 475 aaKnown RBP9.17□□□□□ -0.94
CPNE1-222ENST00000473373 YPEL1O60688 119 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 CD33P20138 364 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 CD1BP29016 333 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 TALDO1P37837 337 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 OR10A3P58181 314 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 HLA-DRB3P79483 266 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 HTD2P86397 168 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 MMDQ15546 238 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 FBLN7Q53RD9 439 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 CT45A1Q5HYN5 189 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 STEAP3Q658P3 488 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 IZUMO1Q8IYV9 350 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 CT45A3Q8NHU0 189 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 CHPT1Q8WUD6 406 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 PHF21AQ96BD5 680 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 ARHGAP5-AS1Q96IT6 56 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 YPEL2Q96QA6 119 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 S1PR3Q99500 378 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 GFI1Q99684 422 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 HDHD3Q9BSH5 251 aaPredicted RBP9.17□□□□□ -0.94
CPNE1-222ENST00000473373 PECRQ9BY49 303 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 YTHDF1Q9BYJ9 559 aaKnown RBP9.17□□□□□ -0.94
CPNE1-222ENST00000473373 C12orf4Q9NQ89 552 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 KIAA1456Q9P272 454 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
CPNE1-222ENST00000473373 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
CPNE1-222ENST00000473373 A0A0A6YYD4 124 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 TRAV1-2A0A0B4J238 106 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 H7C2Y5 167 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 ST8SIA5O15466 376 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 LANCL1O43813 399 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 ZBTB25P24278 435 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 CEACAM6P40199 344 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF134P52741 427 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 PLGLAQ15195 96 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 HMGN3Q15651 99 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 NEDD8Q15843 81 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 C5orf24Q7Z6I8 188 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF329Q86UD4 541 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 SPARTQ8N0X7 666 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 GAPTQ8N292 157 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF439Q8NDP4 499 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 EDARADDQ8WWZ3 215 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 CYYR1Q96J86 154 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 NOL4LQ96MY1 436 aaPredicted RBP9.16□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF251Q9BRH9 671 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 GON7Q9BXV9 100 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 WNT10AQ9GZT5 417 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 ATG5Q9H1Y0 275 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 VCX3AQ9NNX9 186 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 PIPOXQ9P0Z9 390 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 STUB1Q9UNE7 303 aa9.16□□□□□ -0.94
CPNE1-222ENST00000473373 RBM7Q9Y580 266 aaKnown RBP9.16□□□□□ -0.94
CPNE1-222ENST00000473373 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 IFITM5A6NNB3 132 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 AP4M1O00189 453 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 RAB29O14966 203 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 AMY1AP04745 511 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 AMY2AP04746 511 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 SLC2A2P11168 524 aaPredicted RBP9.15□□□□□ -0.94
CPNE1-222ENST00000473373 QRFPP83859 136 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 LSAMPQ13449 338 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 UBE2UQ5VVX9 321 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF773Q6PK81 442 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 MRPL20Q9BYC9 149 aaKnown RBP9.15□□□□□ -0.94
CPNE1-222ENST00000473373 LIN7CQ9NUP9 197 aaKnown RBP9.15□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF221Q9UK13 617 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 HSF4Q9ULV5 492 aa9.15□□□□□ -0.94
CPNE1-222ENST00000473373 SAA2-SAA4A0A096LPE2 208 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 ZNF736B4DX44 427 aaPredicted RBP9.14□□□□□ -0.95
CPNE1-222ENST00000473373 BET1O15155 118 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 NAPSAO96009 420 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 GSTP1P09211 210 aaKnown RBP9.14□□□□□ -0.95
CPNE1-222ENST00000473373 SAA2P0DJI9 122 aaPredicted RBP9.14□□□□□ -0.95
CPNE1-222ENST00000473373 VDAC1P21796 283 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 GALP22466 123 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 SOX6P35712 828 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 OR3A3P47888 321 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 ZNF137PP52743 207 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 MXD1Q05195 221 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 C10orf99Q6UWK7 81 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 OR8H1Q8NGG4 311 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 OR10R2Q8NGX6 335 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 ABHD5Q8WTS1 349 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 ABHD14BQ96IU4 210 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 KCTD7Q96MP8 289 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 CHCHD6Q9BRQ6 235 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 GINS4Q9BRT9 223 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 Q9N2K0 584 aa9.14□□□□□ -0.95
CPNE1-222ENST00000473373 TXNL4BQ9NX01 149 aaKnown RBP9.14□□□□□ -0.95
CPNE1-222ENST00000473373 DAPK2Q9UIK4 370 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms