RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 SIGLEC7Q9Y286 467 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 DTX4Q9Y2E6 619 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 ADGRB2O60241 1585 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 TRGV10A0A0A0MS01 117 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 TARM1B6A8C7 271 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 CD1AP06126 327 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 C1QTNF9P0C862 333 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 OR3A4PP47883 348 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 ERVK11-1P61568 191 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 ZNF56Q15929 161 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 ETDBQ3ZM63 59 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 C10orf113Q5VZT2 155 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 TEX38Q6PEX7 206 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 BCL6BQ8N143 479 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 SSBP3Q9BWW4 388 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 A0A0U1RQS6 177 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 PPYP01298 95 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 CEACAM6P40199 344 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 RPS21P63220 83 aaKnown RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 AGERQ15109 404 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 FAM89BQ8N5H3 189 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 C18orf15Q96N68 181 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 SEBOXQ9HB31 216 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 PRR35P0CG20 571 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 OR10X1Q8NGY0 326 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 OR10AC1Q8NH08 325 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 PPDPFLQ8WWR9 84 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 OXGR1Q96P68 337 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 TMEM242Q9NWH2 141 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 CEP170BQ9Y4F5 1589 aaPredicted RBP7.84□□□□□ -1.15
COL6A3-210ENST00000473258 PXDNQ92626 1479 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 FAM231BA6NCW3 169 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.84□□□□□ -1.15
COL6A3-210ENST00000473258 PSMB5P28074 263 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 GNG5P63218 68 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 S100A7L2Q5SY68 101 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 MRPL43Q8N983 215 aaKnown RBP7.84□□□□□ -1.15
COL6A3-210ENST00000473258 FIZ1Q96SL8 496 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 MYH2Q9UKX2 1941 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 MYO5CQ9NQX4 1742 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 TRAV12-3A0A0B4J271 114 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 METTL12A8MUP2 240 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 GPR6P46095 362 aaPredicted RBP7.84□□□□□ -1.15
COL6A3-210ENST00000473258 PFN3P60673 137 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 RPS11P62280 158 aaKnown RBP eCLIP7.84□□□□□ -1.15
COL6A3-210ENST00000473258 SRSF3P84103 164 aaKnown RBP7.84□□□□□ -1.15
COL6A3-210ENST00000473258 OR8B8Q15620 311 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 VMA21Q3ZAQ7 101 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 PPP1R27Q86WC6 154 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 ZDHHC23Q8IYP9 409 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 RNASE8Q8TDE3 154 aaKnown RBP7.84□□□□□ -1.15
COL6A3-210ENST00000473258 LYRM4Q9HD34 91 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 GPR27Q9NS67 375 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 HCFC2Q9Y5Z7 792 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 KCNE3Q9Y6H6 103 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 DLC1Q96QB1 1528 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 A0A087X0K7 114 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 TMEM30CPA0ZSE6 113 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 C3AR1Q16581 482 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 ZNF750Q32MQ0 723 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 HOGA1Q86XE5 327 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 GAPTQ8N292 157 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 SLC25A40Q8TBP6 338 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 PAXXQ9BUH6 204 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 REG4Q9BYZ8 158 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 GPR132Q9UNW8 380 aa7.84□□□□□ -1.15
COL6A3-210ENST00000473258 CROCC2H7BZ55 1655 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 FGF16O43320 207 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 CXCL1P09341 107 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 ACP1P24666 158 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 PRDX2P32119 198 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 SOX8P57073 446 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 LYZP61626 148 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 DMRTC1Q5HYR2 192 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 C6orf15Q6UXA7 325 aaPredicted RBP7.84□□□□□ -1.16
COL6A3-210ENST00000473258 PRNTQ86SH4 94 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 RNF122Q9H9V4 155 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 YBX2Q9Y2T7 364 aaKnown RBP7.84□□□□□ -1.16
COL6A3-210ENST00000473258 PXMP4Q9Y6I8 212 aa7.84□□□□□ -1.16
COL6A3-210ENST00000473258 F8W1H4 67 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 PTGESO14684 152 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 KRTCAP3Q53RY4 240 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 TMEM170BQ5T4T1 132 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 VKORC1L1Q8N0U8 176 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 ZNF441Q8N8Z8 693 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 A0A0G2JLL6 359 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-210ENST00000473258 FAM157AC9JC47 383 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 SOCS1O15524 211 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 ANKRD39Q53RE8 183 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 C2orf27AQ580R0 203 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 PRRT2Q7Z6L0 340 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-210ENST00000473258 MSRB3Q8IXL7 192 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 KIR3DL3Q8N743 410 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 OR10J6PQ8NGY7 276 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 KLK8O60259 260 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 CD99L2Q8TCZ2 262 aa7.83□□□□□ -1.16
COL6A3-210ENST00000473258 FRRS1LQ9P0K9 344 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms