RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SLC25A16P16260 332 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 CD36P16671 472 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 PSMD7P51665 324 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 ACTBP60709 375 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 ACTG1P63261 375 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 OR4D1Q15615 310 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 FBXO48Q5FWF7 155 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 AADACL4Q5VUY2 407 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 TMIGD2Q96BF3 282 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 TMEM56Q96MV1 263 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 HBEGFQ99075 208 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 TBX5Q99593 518 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 MED18Q9BUE0 208 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 C11orf1Q9H5F2 150 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 COMMD9Q9P000 198 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 FBXL3Q9UKT7 428 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 TENM1Q9UKZ4 2725 aa1.72□□□□□ -2.13
CLK1-209ENST00000472679 MDC1Q14676 2089 aaKnown RBP1.71□□□□□ -2.13
CLK1-209ENST00000472679 DSCAML1Q8TD84 2053 aa1.71□□□□□ -2.13
CLK1-209ENST00000472679 GOLGA8QA0A0J9YX86 632 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 ALOX5APP20292 161 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 CD200P41217 278 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 FAM3AP98173 230 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 TMEM249Q2WGJ8 235 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 TTC33Q6PID6 262 aaPredicted RBP1.71□□□□□ -2.14
CLK1-209ENST00000472679 COPS6Q7L5N1 327 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 TAMM41Q96BW9 452 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 MBOAT7Q96N66 472 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 GPR22Q99680 433 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 MGLLQ99685 303 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 Q9BRP9 147 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 CDCA4Q9BXL8 241 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 PECRQ9BY49 303 aa1.71□□□□□ -2.14
CLK1-209ENST00000472679 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
CLK1-209ENST00000472679 PHYHO14832 338 aa1.7□□□□□ -2.14
CLK1-209ENST00000472679 CYTH3O43739 400 aa1.7□□□□□ -2.14
CLK1-209ENST00000472679 TSPEAR-AS2P59090 65 aa1.7□□□□□ -2.14
CLK1-209ENST00000472679 GTF2BQ00403 316 aa1.7□□□□□ -2.14
CLK1-209ENST00000472679 OR5K1Q8NHB7 308 aa1.7□□□□□ -2.14
CLK1-209ENST00000472679 COL4A1P02462 1669 aa1.7□□□□□ -2.14
CLK1-209ENST00000472679 CR1P17927 2039 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 DHRS12A0PJE2 317 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 LINC00862A6NCI5 91 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 M0QYV0 167 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 MPZL2O60487 215 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 ASS1P00966 412 aaKnown RBP1.69□□□□□ -2.14
CLK1-209ENST00000472679 TPM1P09493 284 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 LINC00313P59037 77 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 OR4X1Q8NH49 305 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 RNASEH2CQ8TDP1 164 aaKnown RBP1.69□□□□□ -2.14
CLK1-209ENST00000472679 CYTH2Q99418 400 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 LINC00527Q9UJ94 153 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 ALG5Q9Y673 324 aa1.69□□□□□ -2.14
CLK1-209ENST00000472679 CLUHO75153 1309 aa1.68□□□□□ -2.14
CLK1-209ENST00000472679 CDK2P24941 298 aa1.68□□□□□ -2.14
CLK1-209ENST00000472679 ETV1P50549 477 aa1.68□□□□□ -2.14
CLK1-209ENST00000472679 FGF12P61328 243 aa1.68□□□□□ -2.14
CLK1-209ENST00000472679 Q6ZSA8 131 aa1.68□□□□□ -2.14
CLK1-209ENST00000472679 TRNT1Q96Q11 434 aaKnown RBP1.68□□□□□ -2.14
CLK1-209ENST00000472679 ZNF471Q9BX82 626 aaPredicted RBP1.68□□□□□ -2.14
CLK1-209ENST00000472679 DNAJC12Q9UKB3 198 aa1.68□□□□□ -2.14
CLK1-209ENST00000472679 KMT2BQ9UMN6 2715 aaPredicted RBP1.68□□□□□ -2.14
CLK1-209ENST00000472679 RTEL1-TNFRSF6BF6WH68 1400 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 RGS12O14924 1447 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 IGLV3-9A0A075B6K5 115 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 UGT2B11O75310 529 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 SYT1P21579 422 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 PEBP1P30086 187 aaKnown RBP1.67□□□□□ -2.14
CLK1-209ENST00000472679 Q6ZRN7 208 aaPredicted RBP1.67□□□□□ -2.14
CLK1-209ENST00000472679 C2orf91Q6ZV80 131 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 DYNC2LI1Q8TCX1 351 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 MND1Q9BWT6 205 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 UGT2B28Q9BY64 529 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 PSMD13Q9UNM6 376 aa1.67□□□□□ -2.14
CLK1-209ENST00000472679 C11orf86A6NJI1 115 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 H3BPC8 53 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 ZW10O43264 779 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 OR13C7P0DN81 318 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 CRHBPP24387 322 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 ADORA1P30542 326 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 OR1E2P47887 323 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 RAB8AP61006 207 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 C1DQ13901 141 aaKnown RBP1.66□□□□□ -2.14
CLK1-209ENST00000472679 OR4X2Q8NGF9 303 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 TNFAIP8L1Q8WVP5 186 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 C19orf60Q96EN9 201 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 ABHD14BQ96IU4 210 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 MED28Q9H204 178 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 PRO2289Q9P1D8 64 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 SNX12Q9UMY4 172 aa1.66□□□□□ -2.14
CLK1-209ENST00000472679 SDK1Q7Z5N4 2213 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 SIGLEC16A6NMB1 481 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 OPRM1P35372 400 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 DAPP51397 102 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 RBM48Q5RL73 367 aaKnown RBP1.65□□□□□ -2.15
CLK1-209ENST00000472679 AGTRAPQ6RW13 159 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 PLCZ1Q86YW0 608 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 SLC35F6Q8N357 371 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 FNDC9Q8TBE3 224 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 CCDC12Q8WUD4 166 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms