RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 OPRM1P35372 400 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 PSMD8P48556 350 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 ZNF117Q03924 483 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 HTR4Q13639 388 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 ZNHIT3Q15649 155 aaPredicted RBP1.51□□□□□ -2.17
PTCD3-209ENST00000472044 CLEC12BQ2HXU8 276 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 LRRC26Q2I0M4 334 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 TMEM176BQ3YBM2 270 aaPredicted RBP1.51□□□□□ -2.17
PTCD3-209ENST00000472044 MRPL51Q4U2R6 128 aaKnown RBP1.51□□□□□ -2.17
PTCD3-209ENST00000472044 FAM45BPQ6NSW5 357 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 DOLPP1Q86YN1 238 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 TMEM75Q8N9X5 138 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 ATP6V1C2Q8NEY4 427 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 TNFAIP8L1Q8WVP5 186 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 MED18Q9BUE0 208 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 GNB1LQ9BYB4 327 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 SAMHD1Q9Y3Z3 626 aaKnown RBP1.51□□□□□ -2.17
PTCD3-209ENST00000472044 GMEB1Q9Y692 573 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 TRPC5OSA6NMA1 111 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 LY6LH3BQJ8 138 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 NDUFS6O75380 124 aaKnown RBP1.5□□□□□ -2.17
PTCD3-209ENST00000472044 CPMP14384 443 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 CDK2P24941 298 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 AGTR1P30556 359 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 GABRA4P48169 554 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 SULT1A2P50226 295 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 FGF12P61328 243 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 SLC35A2P78381 396 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 DEFA6Q01524 100 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 FAM229BQ4G0N7 80 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 XKRXQ6PP77 449 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 SCGB1D4Q6XE38 83 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 BOD1L2Q8IYS8 172 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 ERMNQ8TAM6 284 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 STOML3Q8TAV4 291 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 ATP6V1G3Q96LB4 118 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 KLF6Q99612 283 aaPredicted RBP1.5□□□□□ -2.17
PTCD3-209ENST00000472044 SPACA1Q9HBV2 294 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 NRBP2Q9NSY0 501 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 SNX10Q9Y5X0 201 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 SLX4Q8IY92 1834 aa1.5□□□□□ -2.17
PTCD3-209ENST00000472044 KNCNA6PVL3 124 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 SMLR1H3BR10 107 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 J3QKU1 62 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 ZNF189O75820 626 aaPredicted RBP1.49□□□□□ -2.17
PTCD3-209ENST00000472044 IGLV3-27P01718 113 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 ZNF7P17097 686 aaPredicted RBP1.49□□□□□ -2.17
PTCD3-209ENST00000472044 ORM2P19652 201 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 C1DQ13901 141 aaKnown RBP1.49□□□□□ -2.17
PTCD3-209ENST00000472044 BLIDQ8IZY5 108 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 LFNGQ8NES3 379 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 OR5L1Q8NGL2 311 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 DNAJC30Q96LL9 226 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 TRNT1Q96Q11 434 aaKnown RBP1.49□□□□□ -2.17
PTCD3-209ENST00000472044 CXCL16Q9H2A7 254 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 C11orf1Q9H5F2 150 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 C16orf95Q9H693 158 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 GLS2Q9UI32 602 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.49□□□□□ -2.17
PTCD3-209ENST00000472044 ALG5Q9Y673 324 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 NYNRINQ9P2P1 1898 aaKnown RBP1.49□□□□□ -2.17
PTCD3-209ENST00000472044 RIMS2Q9UQ26 1411 aa1.49□□□□□ -2.17
PTCD3-209ENST00000472044 CHD5Q8TDI0 1954 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 DHRS12A0PJE2 317 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 LINC00862A6NCI5 91 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 S1PR2O95136 353 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 ASS1P00966 412 aaKnown RBP1.48□□□□□ -2.17
PTCD3-209ENST00000472044 ORM1P02763 201 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 RD3LP0DJH9 198 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 CFL1P23528 166 aaKnown RBP1.48□□□□□ -2.17
PTCD3-209ENST00000472044 F8A1P23610 371 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 ATP6V0CP27449 155 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 PSMB6P28072 239 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 LPAR6P43657 344 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 OR1E2P47887 323 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 RWDD2BP57060 319 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 LINC00313P59037 77 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 DEFB103AP81534 67 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 PLCZ1Q86YW0 608 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 NATD1Q8N6N6 113 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 OR11H1Q8NG94 326 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 OR7G1Q8NGA0 311 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 ACY3Q96HD9 319 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 ABHD14BQ96IU4 210 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 RBP7Q96R05 134 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 GPR22Q99680 433 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 MND1Q9BWT6 205 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 METTL9Q9H1A3 318 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 MED28Q9H204 178 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 DNAJC12Q9UKB3 198 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 DSCAMO60469 2012 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 SORL1Q92673 2214 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 DICER1Q9UPY3 1922 aaKnown RBP1.48□□□□□ -2.17
PTCD3-209ENST00000472044 NPATQ14207 1427 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 NAV1Q8NEY1 1877 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 GBF1Q92538 1859 aa1.48□□□□□ -2.17
PTCD3-209ENST00000472044 RAD50Q92878 1312 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 ADGRB3O60242 1522 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 A0A0J9YX75 114 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 FTCDNL1E5RQL4 147 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms