RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 SLC17A2O00624 439 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 CPEP16870 476 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 SLC6A1P30531 599 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 THBS3P49746 956 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 F2RL1P55085 397 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 SLC35B1P78383 322 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 CFHR3Q02985 330 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 TRAM1Q15629 374 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 PRSS48Q7RTY5 328 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 FAM89BQ8N5H3 189 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 TMEM203Q969S6 136 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 GALMQ96C23 342 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 NABP2Q9BQ15 211 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 HSPB9Q9BQS6 159 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 ZNF580Q9UK33 172 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 LRRC42Q9Y546 428 aa9.06□□□□□ -0.96
COL4A3-205ENST00000471862 SOCS1O15524 211 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 DUS4LO95620 317 aaKnown RBP9.05□□□□□ -0.96
COL4A3-205ENST00000471862 HSMCR30P0CW71 290 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 PSMA1P25786 263 aaKnown RBP9.05□□□□□ -0.96
COL4A3-205ENST00000471862 BLVRBP30043 206 aaPredicted RBP9.05□□□□□ -0.96
COL4A3-205ENST00000471862 MAP2K4P45985 399 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 TMEM50BP56557 158 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 FABP5Q01469 135 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 ZNF833PQ6ZTB9 187 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 C8orf86Q6ZUL3 223 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 MRPL41Q8IXM3 137 aaKnown RBP9.05□□□□□ -0.96
COL4A3-205ENST00000471862 RNF152Q8N8N0 203 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 OR51D1Q8NGF3 324 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 P2RX4Q99571 388 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 MGLLQ99685 303 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 RASL11BQ9BPW5 248 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 ZNF251Q9BRH9 671 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 MRPL20Q9BYC9 149 aaKnown RBP9.05□□□□□ -0.96
COL4A3-205ENST00000471862 IFI27L2Q9H2X8 130 aa9.05□□□□□ -0.96
COL4A3-205ENST00000471862 AK6Q9Y3D8 172 aaKnown RBP9.05□□□□□ -0.96
COL4A3-205ENST00000471862 SAA2-SAA4A0A096LPE2 208 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 ARL6IP5O75915 188 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 RGS11O94810 467 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 IGF1P05019 195 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 SAA2P0DJI9 122 aaPredicted RBP9.04□□□□□ -0.96
COL4A3-205ENST00000471862 MYCNOSP40205 109 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 P2RY14Q15391 338 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 TBCEQ15813 527 aaPredicted RBP9.04□□□□□ -0.96
COL4A3-205ENST00000471862 PNLIPRP3Q17RR3 467 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 TEX38Q6PEX7 206 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 IZUMO2Q6UXV1 221 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 MOB1BQ7L9L4 216 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 KLHL30-AS1Q8NEE0 82 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 HDHD3Q9BSH5 251 aaPredicted RBP9.04□□□□□ -0.96
COL4A3-205ENST00000471862 URM1Q9BTM9 101 aaKnown RBP9.04□□□□□ -0.96
COL4A3-205ENST00000471862 CCDC90BQ9GZT6 254 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 AK3Q9UIJ7 227 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 HSF4Q9ULV5 492 aa9.04□□□□□ -0.96
COL4A3-205ENST00000471862 ITGB1BP1O14713 200 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 LDLRAD4O15165 306 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 NDUFA3O95167 84 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 IGHG4P01861 327 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
COL4A3-205ENST00000471862 ELANEP08246 267 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 ARSBP15848 533 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 CNTFRP26992 372 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 CALRP27797 417 aaKnown RBP9.03□□□□□ -0.96
COL4A3-205ENST00000471862 SOX6P35712 828 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 OR3A3P47888 321 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 HSPA13P48723 471 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 KRTAP10-11P60412 298 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 ACTBP60709 375 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 HLA-DRB3P79483 266 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 EGFEM1PQ0D2K5 195 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 FOXE3Q13461 319 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 MMDQ15546 238 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 SSX1Q16384 188 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 ZNF695Q8IW36 515 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 OR2AK2Q8NG84 335 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 RITA1Q96K30 269 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 GON7Q9BXV9 100 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 PARP12Q9H0J9 701 aaKnown RBP9.03□□□□□ -0.96
COL4A3-205ENST00000471862 RIMS4Q9H426 269 aaPredicted RBP9.03□□□□□ -0.96
COL4A3-205ENST00000471862 PLGRKTQ9HBL7 147 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 PLEKHJ1Q9NW61 149 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 ABRACLQ9P1F3 81 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 DNAH9Q9NYC9 4486 aa9.03□□□□□ -0.96
COL4A3-205ENST00000471862 SHISA3A0PJX4 238 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 NUDT19A8MXV4 375 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 K7EIL1 84 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 ST8SIA5O15466 376 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 RRP9O43818 475 aaKnown RBP9.02□□□□□ -0.97
COL4A3-205ENST00000471862 HLA-DRB1P01911 266 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 PSMB8P28062 276 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 PPIFP30405 207 aaKnown RBP9.02□□□□□ -0.97
COL4A3-205ENST00000471862 CDX1P47902 265 aaPredicted RBP9.02□□□□□ -0.97
COL4A3-205ENST00000471862 CLDN12P56749 244 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 RAB11BQ15907 218 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 CD200R1LQ6Q8B3 271 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 LCNL1Q6ZST4 164 aa9.02□□□□□ -0.97
COL4A3-205ENST00000471862 ZNF367Q7RTV3 350 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms