RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CCBE1Q6UXH8 406 aaPredicted RBP12.28□□□□□ -0.44
SDC3-203ENST00000471567 Q6ZSV7 163 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 TAF15Q92804 592 aaKnown RBP eCLIP12.28□□□□□ -0.44
SDC3-203ENST00000471567 NPFFR1Q9GZQ6 430 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 NAA50Q9GZZ1 169 aaKnown RBP12.28□□□□□ -0.44
SDC3-203ENST00000471567 ABCG5Q9H222 651 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 RANBP3Q9H6Z4 567 aaPredicted RBP12.28□□□□□ -0.44
SDC3-203ENST00000471567 DIABLOQ9NR28 239 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 CLPSL1A2RUU4 121 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 ITGB1BP1O14713 200 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 TXNL1O43396 289 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 CHST1O43916 411 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 DIRAS3O95661 229 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 SCTP09683 121 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 FAM106CPP0CH98 169 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.45
SDC3-203ENST00000471567 DTYMKP23919 212 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 ZBTB25P24278 435 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 DIAPH2-AS1Q14236 149 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 Q6ZS49 121 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 C3orf56Q8N813 242 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 ABHD14AQ9BUJ0 271 aa12.27□□□□□ -0.45
SDC3-203ENST00000471567 IGHV1-3A0A0C4DH29 117 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 TIMM23O14925 209 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 FABP7O15540 132 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 LANCL1O43813 399 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 RORCP51449 518 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
SDC3-203ENST00000471567 UBE2NLQ5JXB2 153 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 TMEM219Q86XT9 240 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 DRAM1Q8N682 238 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 OR2AK2Q8NG84 335 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 OR4C13Q8NGP0 309 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 LINC01006Q8NI28 216 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 RTN4IP1Q8WWV3 396 aaPredicted RBP12.26□□□□□ -0.45
SDC3-203ENST00000471567 ACOT12Q8WYK0 555 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 CFHR4Q92496 578 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 S100A16Q96FQ6 103 aaKnown RBP12.26□□□□□ -0.45
SDC3-203ENST00000471567 AKR1E2Q96JD6 320 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 ZNF747Q9BV97 191 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 TOLLIPQ9H0E2 274 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 DCSTAMPQ9H295 470 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 GHITMQ9H3K2 345 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 SLC23A1Q9UHI7 598 aa12.26□□□□□ -0.45
SDC3-203ENST00000471567 TRAV18A0A075B6X5 111 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 TMEM235A6NFC5 223 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 HSPA12AO43301 675 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 OR2F2O95006 317 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 CD24P25063 80 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 CEACAM6P40199 344 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 GNG2P59768 71 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 LYG1Q8N1E2 194 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 OR56B4Q8NH76 319 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 CAPSLQ8WWF8 208 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 EDARADDQ8WWZ3 215 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 CMTM3Q96MX0 182 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 RBM14Q96PK6 669 aaKnown RBP12.25□□□□□ -0.45
SDC3-203ENST00000471567 BCL7BQ9BQE9 202 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 CABLES2Q9BTV7 478 aa12.25□□□□□ -0.45
SDC3-203ENST00000471567 ELF5Q9UKW6 265 aaPredicted RBP12.25□□□□□ -0.45
SDC3-203ENST00000471567 IGKV1-6A0A0C4DH72 117 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 XRCC3O43542 346 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 CD1BP29016 333 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 REG1BP48304 166 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 TMBIM6P55061 237 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 EBI3Q14213 229 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 C11orf88Q6PI97 169 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 MOB3BQ86TA1 216 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 CLVS1Q8IUQ0 354 aaPredicted RBP12.24□□□□□ -0.45
SDC3-203ENST00000471567 ODF3L1Q8IXM7 274 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 SAMD12Q8N8I0 201 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 RAB2BQ8WUD1 216 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 IFI27L2Q9H2X8 130 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 PIPOXQ9P0Z9 390 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 OR1A1Q9P1Q5 309 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 ZNF230Q9UIE0 474 aaPredicted RBP12.24□□□□□ -0.45
SDC3-203ENST00000471567 SCOCQ9UIL1 159 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 RNF114Q9Y508 228 aa12.24□□□□□ -0.45
SDC3-203ENST00000471567 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 M0QZK8 103 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 RAB29O14966 203 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 SNRNP70P08621 437 aaKnown RBP12.23□□□□□ -0.45
SDC3-203ENST00000471567 GSTT2P0CG29 244 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 GSTT2BP0CG30 244 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 ZNF182P17025 639 aaPredicted RBP12.23□□□□□ -0.45
SDC3-203ENST00000471567 HERPUD1Q15011 391 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 IZUMO1Q8IYV9 350 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 Q8N2B8 174 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 OR10J5Q8NHC4 309 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 NUDCD2Q8WVJ2 157 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 AP3S1Q92572 193 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 AGMATQ9BSE5 352 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 SLC25A33Q9BSK2 321 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 ST6GALNAC5Q9BVH7 336 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms