RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 NUBP2Q9Y5Y2 271 aa5.19□□□□□ -1.58
HDAC1-204ENST00000471488 SAA2-SAA4A0A096LPE2 208 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 LOC102724200A0A096LPH7 203 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 UBE2QL1A1L167 161 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 MCRIP1C9JLW8 97 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 SCAF4O95104 1147 aaKnown RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 NDUFB8O95169 186 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 MT-ND4P03905 459 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 SAA2P0DJI9 122 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 MED14OSP0DP75 135 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 EGR2P11161 476 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 RCC1P18754 421 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 RAB3AP20336 220 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 LGALS7P47929 136 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 RBM11P57052 281 aaKnown RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 RPS16P62249 146 aaKnown RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 PRR20EP86478 221 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 PRR20CP86479 221 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 PRR20DP86480 221 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 PRR20BP86481 221 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 PRR20AP86496 221 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 MS4A2Q01362 244 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 TRIM25Q14258 630 aaKnown RBP5.18□□□□□ -1.58
HDAC1-204ENST00000471488 FXYD3Q14802 87 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 SLC22A6Q4U2R8 563 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 AKIRIN2Q53H80 203 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 AADACL4Q5VUY2 407 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 SERPINA12Q8IW75 414 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 C8orf31Q8N9H6 132 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 ZNF439Q8NDP4 499 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 NPBQ8NG41 125 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 OR2AK2Q8NG84 335 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 OR52B4Q8NGK2 314 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 IL1F10Q8WWZ1 152 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 FAM210AQ96ND0 272 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 TAF9BQ9HBM6 251 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 ENOPH1Q9UHY7 261 aa5.18□□□□□ -1.58
HDAC1-204ENST00000471488 DNAH10Q8IVF4 4471 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ZNF785A8K8V0 405 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 B2RBV5 119 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 MPPED1O15442 326 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ST8SIA5O15466 376 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 SPRY2O43597 315 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 NDUFA3O95167 84 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 MT-ND2P03891 347 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 MAS1P04201 325 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 IFNA4P05014 189 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 RPSAP08865 295 aaKnown RBP5.17□□□□□ -1.58
HDAC1-204ENST00000471488 CPEP16870 476 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 EDN2P20800 178 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ZNF137PP52743 207 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ZNF85Q03923 595 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 TNFRSF9Q07011 255 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 RIPK1Q13546 671 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 GK3PQ14409 553 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 MORN2Q502X0 79 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 RPL39P5Q59GN2 51 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 C19orf54Q5BKX5 351 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ELP2Q6IA86 826 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 CD200R1LQ6Q8B3 271 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ZNF497Q6ZNH5 498 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 KCTD20Q7Z5Y7 419 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 SPATA24Q86W54 205 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ZDHHC13Q8IUH4 622 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 TMEM217Q8N7C4 229 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 PXT1Q8NFP0 134 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 OR51A2Q8NGJ7 313 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 OR2K2Q8NGT1 345 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 SETD6Q8TBK2 473 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 CANT1Q8WVQ1 401 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 CACNG8Q8WXS5 425 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 THRSPQ92748 146 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 SNAPC3Q92966 411 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 TMEM106AQ96A25 262 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 RNF183Q96D59 192 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 C4orf36Q96KX1 117 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 ARGLU1Q9NWB6 273 aaPredicted RBP5.17□□□□□ -1.58
HDAC1-204ENST00000471488 TAS2R4Q9NYW5 299 aa5.17□□□□□ -1.58
HDAC1-204ENST00000471488 A0A1W2PP11 408 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 H3BNX3 289 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 SLC22A1O15245 554 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 OR2A4O95047 310 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 FADS2O95864 444 aaKnown RBP5.16□□□□□ -1.58
HDAC1-204ENST00000471488 HLA-AP01891 365 aaKnown RBP5.16□□□□□ -1.58
HDAC1-204ENST00000471488 ISG15P05161 165 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 RPL35AP18077 110 aaKnown RBP5.16□□□□□ -1.58
HDAC1-204ENST00000471488 AADACP22760 399 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 EPHA2P29317 976 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 BMI1P35226 326 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 DAPP51397 102 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 ALDH3A2P51648 485 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 NANOS2P60321 138 aaKnown RBP5.16□□□□□ -1.58
HDAC1-204ENST00000471488 ALKBH1Q13686 389 aaKnown RBP5.16□□□□□ -1.58
HDAC1-204ENST00000471488 PSG5Q15238 335 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 MOGAT2Q3SYC2 334 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 Q3ZCU0 254 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 DDI2Q5TDH0 399 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 RAB12Q6IQ22 244 aa5.16□□□□□ -1.58
HDAC1-204ENST00000471488 LAX1Q8IWV1 398 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms