RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 FAM90A10PA6NDY2 464 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 SAC3D1A6NKF1 404 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 G3V318 75 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 CIB2O75838 187 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 JTBO76095 146 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 LGALS1P09382 135 aaKnown RBP7.06□□□□□ -1.28
CPSF4-211ENST00000471455 BDKRB2P30411 391 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 TMEM267Q0VDI3 215 aaPredicted RBP7.06□□□□□ -1.28
CPSF4-211ENST00000471455 RIPK1Q13546 671 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 ECSCRQ19T08 205 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 C5orf64Q2M2E5 130 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 SLC22A6Q4U2R8 563 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 CCDC58Q4VC31 144 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 CT45A1Q5HYN5 189 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 SYT6Q5T7P8 510 aaPredicted RBP7.06□□□□□ -1.28
CPSF4-211ENST00000471455 LIN54Q6MZP7 749 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 PRR18Q8N4B5 295 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 ZNF439Q8NDP4 499 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 OR10V1Q8NGI7 309 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 CT45A3Q8NHU0 189 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 UBALD1Q8TB05 177 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 TM2D3Q9BRN9 247 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 ABHD14AQ9BUJ0 271 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 KLK15Q9H2R5 256 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 ISG20L2Q9H9L3 353 aaKnown RBP7.06□□□□□ -1.28
CPSF4-211ENST00000471455 OR2S2Q9NQN1 319 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 JPT1Q9UK76 154 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 STUB1Q9UNE7 303 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 FOXA2Q9Y261 457 aaPredicted RBP7.06□□□□□ -1.28
CPSF4-211ENST00000471455 GMPPBQ9Y5P6 360 aa7.06□□□□□ -1.28
CPSF4-211ENST00000471455 HUWE1Q7Z6Z7 4374 aaKnown RBP7.06□□□□□ -1.28
CPSF4-211ENST00000471455 IGHV7-81A0A0B4J1V7 117 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 FAM90A7PA6NKC0 464 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 FAM90A23PA8MXZ1 464 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 SLC31A2O15432 143 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 HSPA12AO43301 675 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 HBZP02008 142 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ALPLP05186 524 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 GLAP06280 429 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 BLVRBP30043 206 aaPredicted RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 KIAA0141Q14154 515 aaPredicted RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 KIR3DS1Q14943 382 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 PLGLAQ15195 96 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 SRSF7Q16629 238 aaKnown RBP eCLIP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ANKRD39Q53RE8 183 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ZNF660Q6AZW8 331 aaPredicted RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ZFAND6Q6FIF0 208 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 RAB12Q6IQ22 244 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 FAM71F2Q6NXP2 309 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ACSM6Q6P461 480 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 RPL22L1Q6P5R6 122 aaKnown RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 TMPRSS11AQ6ZMR5 421 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ANKRD13BQ86YJ7 626 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 MINDY2Q8NBR6 621 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 IL17DQ8TAD2 202 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ABHD5Q8WTS1 349 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 ARPC1AQ92747 370 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 DLX4Q92988 240 aaPredicted RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 SPATA25Q9BR10 227 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 TOLLIPQ9H0E2 274 aa7.05□□□□□ -1.28
CPSF4-211ENST00000471455 RCC2Q9P258 522 aaKnown RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 NKX1-2Q9UD57 310 aaPredicted RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 RPL36Q9Y3U8 105 aaKnown RBP7.05□□□□□ -1.28
CPSF4-211ENST00000471455 A0A1W2PN81 502 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 IRGMA1A4Y4 181 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 TRIM64CA6NLI5 447 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 A8MZ25 164 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 E9PI62 339 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 ATP5HO75947 161 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 HSPB1P04792 205 aaKnown RBP7.04□□□□□ -1.28
CPSF4-211ENST00000471455 IFNA6P05013 189 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 IGHV4-30-4P0DP06 118 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 CHRNA7P36544 502 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 VHLP40337 213 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 VEGFCP49767 419 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 ALDH3A2P51648 485 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 ZNF134P52741 427 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 CRIP2P52943 208 aaPredicted RBP7.04□□□□□ -1.28
CPSF4-211ENST00000471455 SLURP1P55000 103 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 HTD2P86397 168 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 GAPTQ8N292 157 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 NPBQ8NG41 125 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 OR2AK2Q8NG84 335 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 OR4K15Q8NH41 348 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 OR1L1Q8NH94 360 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 ZNF184Q99676 751 aaPredicted RBP7.04□□□□□ -1.28
CPSF4-211ENST00000471455 MRPL20Q9BYC9 149 aaKnown RBP7.04□□□□□ -1.28
CPSF4-211ENST00000471455 ANKRD60Q9BZ19 345 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 SLA2Q9H6Q3 261 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 TAF9BQ9HBM6 251 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 ZNF581Q9P0T4 197 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 STEAP1Q9UHE8 339 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 LRRC42Q9Y546 428 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 PEX16Q9Y5Y5 336 aa7.04□□□□□ -1.28
CPSF4-211ENST00000471455 SACSQ9NZJ4 4579 aa7.03□□□□□ -1.28
CPSF4-211ENST00000471455 IGHV4OR15-8A0A075B7B6 117 aa7.03□□□□□ -1.28
CPSF4-211ENST00000471455 A0A087WW49 117 aa7.03□□□□□ -1.28
CPSF4-211ENST00000471455 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
CPSF4-211ENST00000471455 OR5H14A6NHG9 310 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms