RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C9orf135Q5VTT2 229 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 LIPNQ5VXI9 398 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 FAM71F2Q6NXP2 309 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 TMEM53Q6P2H8 277 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 LRRN1Q6UXK5 716 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 STAC2Q6ZMT1 411 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 BHLHA15Q7RTS1 189 aaPredicted RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SSX6Q7RTT6 188 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 FAM220AQ7Z4H9 259 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SLC38A6Q8IZM9 456 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 YIPF7Q8N8F6 280 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 ZSCAN4Q8NAM6 433 aaPredicted RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OR4C5Q8NGB2 326 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OR10A7Q8NGE5 316 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OR4D5Q8NGN0 318 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OR13F1Q8NGS4 319 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 LILRB4Q8NHJ6 448 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 DLX4Q92988 240 aaPredicted RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 LHX4Q969G2 390 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SPTSSAQ969W0 71 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SLAMF6Q96DU3 332 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 PELI1Q96FA3 418 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SH3GL3Q99963 347 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OR2H1Q9GZK4 316 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 COMMD4Q9H0A8 199 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 HDHD2Q9H0R4 259 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OPN3Q9H1Y3 402 aaPredicted RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 HEATR1Q9H583 2144 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 ISG20L2Q9H9L3 353 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SLC17A5Q9NRA2 495 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 B3GNT2Q9NY97 397 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 MRM2Q9UI43 246 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 GNG8Q9UK08 70 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 IKZF2Q9UKS7 526 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 KLHDC2Q9Y2U9 406 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 KMT2BQ9UMN6 2715 aaPredicted RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SPTBN1Q01082 2364 aaKnown RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 CHD6Q8TD26 2715 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 FAM208BQ5VWN6 2430 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 PPIAL4EA0A075B759 164 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 SMIM31A0A1B0GVY4 71 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 TMEM269A0A1B0GVZ9 245 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 BTBD17A6NE02 478 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OR5H1A6NKK0 313 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 FAM74A7A6NL05 159 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 TMEM212A6NML5 194 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 EEF1E1-BLOC1S5C9J1V9 151 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 H3BSA7 217 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF701M0R085 212 aaPredicted RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 MAGEB4O15481 346 aaPredicted RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 EEF1E1O43324 174 aaKnown RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 LYZL6O75951 148 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 RPP14O95059 124 aaKnown RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 LALBAP00709 142 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 HLA-HP01893 362 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 HLA-DPB1P04440 258 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 SERPINA5P05154 406 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ISG15P05161 165 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 PPIAL4FP0DN26 164 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 PSKH1P11801 424 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 CD79AP11912 226 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 CBR1P16152 277 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 CD36P16671 472 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 CELP19835 753 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 IL32P24001 234 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 HSD11B1P28845 292 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OTX1P32242 354 aaPredicted RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 CD79BP40259 229 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 RPL13AP40429 203 aaKnown RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 TMBIM6P55061 237 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 RSPO1Q2MKA7 263 aaPredicted RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF829Q3KNS6 432 aaPredicted RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 FBXL19-AS1Q494R0 122 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 FAM74A3Q4VXF1 159 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 HIKESHIQ53FT3 197 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 PABPC1L2AQ5JQF8 200 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 TIMM23BQ5SRD1 257 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OTPQ5XKR4 325 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 RNASEKQ6P5S7 137 aaKnown RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 XKRXQ6PP77 449 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ARL9Q6T311 187 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ATRAIDQ6UW56 229 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 DRAM2Q6UX65 266 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 BTNL3Q6UXE8 466 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 MS4A15Q8N5U1 240 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 RELL2Q8NC24 303 aaPredicted RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 BPIFCQ8NFQ6 507 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OR52H1Q8NGJ2 320 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OR2G2Q8NGZ5 317 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OR5AK2Q8NH90 309 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OR1F12Q8NHA8 337 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF420Q8TAQ5 688 aaPredicted RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 RPS4Y2Q8TD47 263 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 GHSRQ92847 366 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 UFD1Q92890 307 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 RPL3LQ92901 407 aaKnown RBP3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ITFG2Q969R8 447 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 TMIGD2Q96BF3 282 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 HAVCR1Q96D42 359 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 DGCR14Q96DF8 476 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms