RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 HEPN1Q6WQI6 88 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 GLDNQ6ZMI3 551 aaPredicted RBP10.88□□□□□ -0.67
HMGN1-211ENST00000471260 OR5D18Q8NGL1 313 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 OR52I2Q8NH67 350 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF596Q8TC21 504 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 TSEN15Q8WW01 171 aaKnown RBP10.88□□□□□ -0.67
HMGN1-211ENST00000471260 CFHR4Q92496 578 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF436Q9C0F3 470 aaPredicted RBP10.88□□□□□ -0.67
HMGN1-211ENST00000471260 NCOR1P1Q9H4R4 102 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 SCPEP1Q9HB40 452 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 CKLFQ9UBR5 152 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 MTFP1Q9UDX5 166 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 MGAT4AQ9UM21 535 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 A0A0B4J203 849 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 FAM90A22PA8MWA6 464 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 F2RL2O00254 374 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 SLC33A1O00400 549 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-211ENST00000471260 DEGS1O15121 323 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 ALDOBP05062 364 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 CDK2P24941 298 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 CD34P28906 385 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 RAB13P51153 203 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 CCR6P51684 374 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 ARHGDIBP52566 201 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 AESQ08117 197 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 RAB11BQ15907 218 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 PDLIM3Q53GG5 364 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-211ENST00000471260 KRBOX4Q5JUW0 171 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 TEX261Q6UWH6 196 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 C16orf82Q7Z2V1 217 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 ABHD12Q8N2K0 398 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 KLHDC1Q8N7A1 406 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 NKAIN3Q8N8D7 197 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF565Q8N9K5 539 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 Q8NFD4 153 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 OR51T1Q8NGJ9 327 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 TMEM106AQ96A25 262 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 PTX4Q96A99 478 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 PRSS22Q9GZN4 317 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF702PQ9H963 129 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 OR6C3Q9NZP0 311 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 DPM3Q9P2X0 92 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 SIGLEC9Q9Y336 463 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 HILPDAQ9Y5L2 63 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 U3KQ87 197 aa10.87□□□□□ -0.67
HMGN1-211ENST00000471260 TET2Q6N021 2002 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-211ENST00000471260 A0A087X0M5 115 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 A0A1B0GX30 115 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 A0A1W2PPK0 400 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 ODAMA1E959 279 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 UBE2QL1A1L167 161 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF729A6NN14 1252 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-211ENST00000471260 SCGNO76038 276 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 TSPAN15O95858 294 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 BRS3P32247 399 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 GLIPR1P48060 266 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 KCNJ3P48549 501 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 PAX5Q02548 391 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 IL13RA2Q14627 380 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 CLLU1Q5K131 121 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 GLT8D1Q68CQ7 371 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 RNF144BQ7Z419 303 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 UXS1Q8NBZ7 420 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 OR4D6Q8NGJ1 314 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 OR4P4Q8NGL7 312 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 OR6M1Q8NGM8 313 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 GPER1Q99527 375 aa10.86□□□□□ -0.67
HMGN1-211ENST00000471260 NKX3-1Q99801 234 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-211ENST00000471260 KIAA2026Q5HYC2 2103 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 LEUTXA8MZ59 168 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 RBBP9O75884 186 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 MMP23AO75900 390 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 SLC22A5O76082 557 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 IGLV1-47P01700 117 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 AKAIN1P0CW23 69 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 CEACAM3P40198 252 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 PTGFRP43088 359 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 PRRX1P54821 245 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 ASCL4Q6XD76 172 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 COQ2Q96H96 371 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 AKR1E2Q96JD6 320 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 TMEM138Q9NPI0 162 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 SERTAD4Q9NUC0 356 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 UBQLN2Q9UHD9 624 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 MEGF8Q7Z7M0 2845 aa10.85□□□□□ -0.67
HMGN1-211ENST00000471260 OOSP1A8MZH6 123 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 ARPC1BO15143 372 aaKnown RBP10.84□□□□□ -0.67
HMGN1-211ENST00000471260 OR2A4O95047 310 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 VSIG10L2P0DP72 767 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 CXCL3P19876 107 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 RAB6AP20340 208 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 OR3A3P47888 321 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 VEGFCP49767 419 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 AP2S1P53680 142 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-211ENST00000471260 RSU1Q15404 277 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 RNASE12Q5GAN4 147 aaKnown RBP10.84□□□□□ -0.67
HMGN1-211ENST00000471260 PRAMEF5Q5TYX0 476 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 TMEM219Q86XT9 240 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF680Q8NEM1 530 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 OR8H1Q8NGG4 311 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms