RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 OR8G1Q15617 311 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 HNRNPA1L2Q32P51 320 aaKnown RBP0.17□□□□□ -2.38
UBXN4-207ENST00000471246 KRTAP21-1Q3LI58 79 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 FAM229BQ4G0N7 80 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ACTBL2Q562R1 376 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 FAM27D1Q5T7N8 215 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 NXNL2Q5VZ03 156 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ELP2Q6IA86 826 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ALPK2Q86TB3 2170 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CTAGE6Q86UF2 777 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CYP4Z1Q86W10 505 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 NELFCDQ8IXH7 590 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 MICU2Q8IYU8 434 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 FAM58AQ8N1B3 248 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 C10orf126Q8N4M7 172 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 KRTCAP2Q8N6L1 136 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PROKR2Q8NFJ6 384 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 TCP10LQ8TDR4 215 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 KCTD4Q8WVF5 259 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PIH1D2Q8WWB5 315 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 TMBIM1Q969X1 311 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 FMC1Q96HJ9 113 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 REEP6Q96HR9 211 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CPB2Q96IY4 423 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CAPZA3Q96KX2 299 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 LINC01587Q99440 93 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 Q9BRP9 147 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PEG3Q9GZU2 1588 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 POMKQ9H5K3 350 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 VCX3AQ9NNX9 186 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 C12orf4Q9NQ89 552 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 MRPL22Q9NWU5 206 aaKnown RBP0.17□□□□□ -2.38
UBXN4-207ENST00000471246 RAB20Q9NX57 234 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 DOK5Q9P104 306 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PEF1Q9UBV8 284 aaKnown RBP0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ZMAT5Q9UDW3 170 aaKnown RBP0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ANXA10Q9UJ72 324 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 FBXL3Q9UKT7 428 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CFL2Q9Y281 166 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 BTRCQ9Y297 605 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 AP3M1Q9Y2T2 418 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 MARF1Q9Y4F3 1742 aaKnown RBP0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ZGRF1Q86YA3 2104 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 TSC2P49815 1807 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ARAP3Q8WWN8 1544 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 MYO15BQ96JP2 1530 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 SBNO1A3KN83 1393 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 DSCAML1Q8TD84 2053 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CASZ1Q86V15 1759 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PREX2Q70Z35 1606 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 USP32Q8NFA0 1604 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 C1orf167Q5SNV9 1468 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 RALGAPA2Q2PPJ7 1873 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 TNXBP22105 4242 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 TTC37Q6PGP7 1564 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 UGGT1Q9NYU2 1555 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 MYH11P35749 1972 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 SCN9AQ15858 1988 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF609O15014 1411 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 DNAH11Q96DT5 4516 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 RBFOX3A6NFN3 312 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 CENPXA8MT69 81 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 H3BP45 60 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 GOLGA8TH3BQL2 631 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 H7C2Y5 167 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 WRBO00258 174 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF593O00488 134 aaPredicted RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 SFTPCP11686 197 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 CD36P16671 472 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 P2RY2P41231 377 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 MAGEA12P43365 314 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 XKP51811 444 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 PSMD4P55036 377 aaKnown RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 RWDD2BP57060 319 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 RPL31P62899 125 aaKnown RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 SLC35B1P78383 322 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 LCN2P80188 198 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF117Q03924 483 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 APOFQ13790 326 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 WDR43Q15061 677 aaKnown RBP eCLIP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 CEACAM16Q2WEN9 425 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 KRTAP19-6Q3LI70 58 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 TIMM23BQ5SRD1 257 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 FAM201AQ5SY85 155 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 PLCXD3Q63HM9 321 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 OR2W3Q7Z3T1 314 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 COA5Q86WW8 74 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 KATNAL2Q8IYT4 538 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 GAPTQ8N292 157 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 OR52K1Q8NGK4 314 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 OR51A7Q8NH64 312 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 PEX13Q92968 403 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 OLFM3Q96PB7 478 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 GPR22Q99680 433 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ANP32EQ9BTT0 268 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 CYSTM1Q9H1C7 97 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 WDR55Q9H6Y2 383 aaPredicted RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 EXO5Q9H790 373 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 TXNL4BQ9NX01 149 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms