RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 NPIPA1Q9UND3 350 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 ARL2-SNX15V9GYD0 113 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 HEATR1Q9H583 2144 aaKnown RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 RANBP2P49792 3224 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 MUC21A0A0G2JKD1 596 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 MUC21A0A140T8X8 626 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 LRP5LA4QPB2 252 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 C17orf51A8MQB3 221 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 AHRRA9YTQ3 701 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 HS3ST1O14792 307 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 MPPED1O15442 326 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 NDUFB4O95168 129 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 HAND1O96004 215 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 HLA-DOBP13765 273 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 FBLP22087 321 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 LHX2P50458 406 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 FABP6P51161 128 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 FBXW4P57775 412 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 LINC00310P59036 64 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ARF6P62330 175 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SLC35B1P78383 322 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SRPXP78539 464 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 RPL24P83731 157 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 RHOGP84095 191 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 RBPJQ06330 500 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ZNF141Q15928 474 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 GABRA6Q16445 453 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SPANXN5Q5MJ07 72 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PHYHD1Q5SRE7 291 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 MUC21Q5SSG8 566 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 KIAA0895LQ68EN5 471 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 BCORP1Q8N888 145 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR10P1Q8NGE3 313 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR10W1Q8NGF6 305 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR1B1Q8NGR6 318 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 HOXB13Q92826 284 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 C1orf147Q96MC9 270 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 LRFN3Q9BTN0 628 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 TXNIPQ9H3M7 391 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 GNB4Q9HAV0 340 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 MED29Q9NX70 200 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ABI3Q9P2A4 366 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 FBLN5Q9UBX5 448 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 CCL26Q9Y258 94 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 MED12Q93074 2177 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SLC17A3O00476 420 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 TAX1BP3O14907 124 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 S1PR2O95136 353 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 APOA2P02652 100 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PRNPP04156 253 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 C8AP07357 584 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 DEFA4P12838 97 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PEBP1P30086 187 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 GUCA1AP43080 201 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 ZNF83P51522 516 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ZNF121P58317 390 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 HBG1P69891 147 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 HBG2P69892 147 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 TGFBR3Q03167 851 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 RSPO4Q2I0M5 234 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 PLCXD3Q63HM9 321 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ADAMTSL4Q6UY14 1074 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 GTF2H5Q6ZYL4 71 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 TBC1D26Q86UD7 250 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR8I2Q8N0Y5 310 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 BATF2Q8N1L9 274 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SLC39A11Q8N1S5 342 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PNKDQ8N490 385 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 RPP25LQ8N5L8 163 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 LRTM2Q8N967 370 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 TSTD1Q8NFU3 115 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR10G8Q8NGN5 311 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR5B3Q8NH48 314 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ZNF519Q8TB69 540 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ASB10Q8WXI3 467 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SFRP2Q96HF1 295 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 UHRF2Q96PU4 802 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 NUDT22Q9BRQ3 303 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 TMEM204Q9BSN7 226 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 DERL1Q9BUN8 251 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 FNDC4Q9H6D8 234 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 FAM206AQ9NX38 181 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 CLEC1BQ9P126 229 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SERGEFQ9UGK8 458 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 RALGAPA1Q6GYQ0 2036 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 TRAV36DV7A0A075B6V5 113 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SIRPB1O00241 398 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PLPP3O14495 311 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SLC31A1O15431 190 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SRSF10O75494 262 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 HSBP1O75506 76 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PVRP15151 417 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OTX1P32242 354 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR1D4P47884 311 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PPOXP50336 477 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 CCR5P51681 352 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PLP1P60201 277 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 POU3F1Q03052 451 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 SP5Q6BEB4 398 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms