RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PIGLQ9Y2B2 252 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 CAB39Q9Y376 341 aaPredicted RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 AK6Q9Y3D8 172 aaKnown RBP3.01□□□□□ -1.93
COL9A1-206ENST00000470652 SNX5Q9Y5X3 404 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 UNC79Q9P2D8 2635 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 KIAA2026Q5HYC2 2103 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 ZFHX3Q15911 3703 aa3.01□□□□□ -1.93
COL9A1-206ENST00000470652 A0A087WXM4 84 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 IGKV1-12A0A0C4DH73 117 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 A0A1B0GVI7 797 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 FAM230AA0A1W2PPH8 454 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 SNTNA6NMZ2 147 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 CASKO14936 926 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 TIMM8AO60220 97 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 GMDSO60547 372 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 FCN3O75636 299 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 CYB5R3P00387 301 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 IGKV1D-12P01611 117 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 MAS1P04201 325 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 COX5BP10606 129 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 CCL1P22362 96 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 COL8A2P25067 703 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 CALRP27797 417 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 CD80P33681 288 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 GLRXP35754 106 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 OR3A4PP47883 348 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 RGS6P49758 472 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 GPM6AP51674 278 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 BLVRAP53004 296 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 DLX1P56177 255 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 KRTAP12-2P59991 146 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 ACTA2P62736 377 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 ACTG2P63267 376 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 CCL8P80075 99 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 PRB3Q04118 309 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 MLLT11Q13015 90 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 PRDX4Q13162 271 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 MAB21L1Q13394 359 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 TPBGQ13641 420 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 P2RY14Q15391 338 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF829Q3KNS6 432 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 ACSM3Q53FZ2 586 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 AVPI1Q5T686 147 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 SYT6Q5T7P8 510 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 HES5Q5TA89 166 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 PLCXD3Q63HM9 321 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 C11orf71Q6IPW1 123 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 RPL22L1Q6P5R6 122 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 DRAM2Q6UX65 266 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 SIGLEC15Q6ZMC9 328 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 TMPRSS11AQ6ZMR5 421 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 PGAP1Q75T13 922 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 CLVS1Q8IUQ0 354 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 OR2Z1Q8NG97 314 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 OR13F1Q8NGS4 319 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 OR5AK2Q8NH90 309 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 SYNPRQ8TBG9 265 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 UFD1Q92890 307 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 MRPL24Q96A35 216 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 APOBEC3DQ96AK3 386 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 RBMXL1Q96E39 390 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF414Q96IQ9 312 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 DCUN1D5Q9BTE7 237 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 ADAT1Q9BUB4 502 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 CACNG6Q9BXT2 260 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 MRPS26Q9BYN8 205 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 INPP5EQ9NRR6 644 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF275Q9NSD4 429 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 TXNL4BQ9NX01 149 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 NDUFB11Q9NX14 153 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 EIF3KQ9UBQ5 218 aaKnown RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 BLOC1S6Q9UL45 172 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 KLF2Q9Y5W3 355 aaPredicted RBP3□□□□□ -1.93
COL9A1-206ENST00000470652 TMEM14AQ9Y6G1 99 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 KIF25-AS1Q9Y6Z4 181 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 V9GYS6 101 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 DSCAML1Q8TD84 2053 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 SVEP1Q4LDE5 3571 aa3□□□□□ -1.93
COL9A1-206ENST00000470652 DOCK11Q5JSL3 2073 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 IGLV3-9A0A075B6K5 115 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 A0A087X0K7 114 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 TRAV39A0A0B4J263 110 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 IRGMA1A4Y4 181 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 IQCF6A8MYZ5 107 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF879B4DU55 563 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 H3BMQ9 156 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.99□□□□□ -1.93
COL9A1-206ENST00000470652 CCRL2O00421 344 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 PHYHO14832 338 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 AIREO43918 545 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF254O75437 659 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 SC5DO75845 299 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 DHRS3O75911 302 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 CDRT1O95170 752 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 PAHP00439 452 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 FCER2P06734 321 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 TACSTD2P09758 323 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 OR9G9P0C7N8 305 aa2.99□□□□□ -1.93
COL9A1-206ENST00000470652 OCM2P0CE71 109 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms