RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 OR2A7Q96R45 310 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 OR4K3Q96R72 315 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 PBDC1Q9BVG4 233 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 SLC25A31Q9H0C2 315 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 ZDHHC11Q9H8X9 412 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 HMG20AQ9NP66 347 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 LYRM2Q9NU23 88 aaPredicted RBP2.84□□□□□ -1.95
COL11A1-208ENST00000470170 COPZ2Q9P299 210 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 JPT1Q9UK76 154 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 SSR3Q9UNL2 185 aa2.84□□□□□ -1.95
COL11A1-208ENST00000470170 YTHDF2Q9Y5A9 579 aaKnown RBP2.84□□□□□ -1.95
COL11A1-208ENST00000470170 CEP152O94986 1710 aa2.84□□□□□ -1.96
COL11A1-208ENST00000470170 NPHP4O75161 1426 aaPredicted RBP2.84□□□□□ -1.96
COL11A1-208ENST00000470170 MTCL1Q9Y4B5 1905 aaKnown RBP2.83□□□□□ -1.96
COL11A1-208ENST00000470170 MED1Q15648 1581 aaPredicted RBP2.83□□□□□ -1.96
COL11A1-208ENST00000470170 TOP2BQ02880 1626 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 THSD7BQ9C0I4 1608 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 IGLV4-60A0A075B6I1 120 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 BORCS7-ASMTA0A0B4J1R7 106 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 GMNCA6NCL1 334 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 FAM183AA6NL82 134 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 C5orf58C9J3I9 102 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 G3V2T6 193 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 TRAPPC2LH3BP13 241 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 K7EQS6 105 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 AIPO00170 330 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 PSPHP1O15172 72 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 PDCD6O75340 191 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 GCM2O75603 506 aaPredicted RBP2.83□□□□□ -1.96
COL11A1-208ENST00000470170 CDRT1O95170 752 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 HBZP02008 142 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 OR56A5P0C7T3 313 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 CYBAP13498 195 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 ZNF708P17019 499 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 GPX2P18283 190 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 CXCL3P19876 107 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 PSMD8P48556 350 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 P2RX1P51575 399 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 PIGPP57054 158 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 TAS2R46P59540 309 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 RPS21P63220 83 aaKnown RBP2.83□□□□□ -1.96
COL11A1-208ENST00000470170 IFITM3Q01628 133 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 NSDHLQ15738 373 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 NANOGP8Q6NSW7 305 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 LPCAT3Q6P1A2 487 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 UNQ9370/PRO34162Q6UXP9 181 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 OR11H6Q8NGC7 330 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 OR52L1Q8NGH7 329 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 OR4D11Q8NGI4 311 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 OR9Q1Q8NGQ5 310 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 OR4K15Q8NH41 348 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 OR5K1Q8NHB7 308 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 EXOSC8Q96B26 276 aaKnown RBP2.83□□□□□ -1.96
COL11A1-208ENST00000470170 CAPZA3Q96KX2 299 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 BMFQ96LC9 184 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 DNAJC30Q96LL9 226 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 PPP1R2P1Q96PQ5 205 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 HSPB9Q9BQS6 159 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 EFCAB11Q9BUY7 163 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 SH3BGRL3Q9H299 93 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 HEBP1Q9NRV9 189 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 ZNF226Q9NYT6 803 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 MRPL27Q9P0M9 148 aaKnown RBP2.83□□□□□ -1.96
COL11A1-208ENST00000470170 SS18L2Q9UHA2 77 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 RSL24D1Q9UHA3 163 aaKnown RBP2.83□□□□□ -1.96
COL11A1-208ENST00000470170 PRNDQ9UKY0 176 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 UGT2A1Q9Y4X1 527 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 PALLDQ8WX93 1383 aa2.83□□□□□ -1.96
COL11A1-208ENST00000470170 LTBP4Q8N2S1 1624 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.82□□□□□ -1.96
COL11A1-208ENST00000470170 A0A1B0GXF2 115 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 A0A1W2PRE2 83 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 H7C1C5 153 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 M0QYV0 167 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 HMGB3O15347 200 aaKnown RBP2.82□□□□□ -1.96
COL11A1-208ENST00000470170 DLEU1O43261 78 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 MFSD11O43934 449 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 NDUFC2O95298 119 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 IFNA10P01566 189 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 DBIP07108 87 aaKnown RBP2.82□□□□□ -1.96
COL11A1-208ENST00000470170 PFN1P07737 140 aaKnown RBP2.82□□□□□ -1.96
COL11A1-208ENST00000470170 CXCL2P19875 107 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 RAB3AP20336 220 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 PRSS3P35030 304 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 RAB13P51153 203 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 NDUFA8P51970 172 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 HERVK_113P61574 105 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 LCN6P62502 163 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 GNG5P63218 68 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 PRDX4Q13162 271 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 ARFRP1Q13795 201 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 CENPWQ5EE01 88 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 COA6Q5JTJ3 125 aaKnown RBP2.82□□□□□ -1.96
COL11A1-208ENST00000470170 HENMT1Q5T8I9 393 aaKnown RBP2.82□□□□□ -1.96
COL11A1-208ENST00000470170 SPATA31B1PQ5VZV4 182 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 ZFAND6Q6FIF0 208 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 GOLT1AQ6ZVE7 132 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 FA2HQ7L5A8 372 aa2.82□□□□□ -1.96
COL11A1-208ENST00000470170 ZNF550Q7Z398 422 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms