RNA–Protein interactions for RNA: ENST00000470150.5

CHRD-212, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-212ENST00000470150 FAM24AA6NFZ4 105 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 ZNF727A8MUV8 499 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 SSSCA1O60232 199 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 SMIM6P0DI80 62 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
CHRD-212ENST00000470150 RAB11AP62491 216 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 UBE2V2Q15819 145 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 NIPSNAP3BQ9BS92 247 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 PCGF1Q9BSM1 259 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 PLEKHA2Q9HB19 425 aa12.15□□□□□ -0.46
CHRD-212ENST00000470150 BTBD17A6NE02 478 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 SRP14P37108 136 aaKnown RBP12.14□□□□□ -0.47
CHRD-212ENST00000470150 NHLH2Q02577 135 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 HIST2H3PS2Q5TEC6 136 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 C1orf162Q8NEQ5 155 aaPredicted RBP12.14□□□□□ -0.47
CHRD-212ENST00000470150 OR8B3Q8NGG8 313 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 OR8B2Q96RD0 313 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 PRO1933Q9H354 126 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 BARX1Q9HBU1 254 aaPredicted RBP12.14□□□□□ -0.47
CHRD-212ENST00000470150 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 SERPINE3A8MV23 424 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 LYNX1G3V0Z9 82 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 CYB5BO43169 146 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 LYNX1P0DP58 116 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 ASPHD2Q6ICH7 369 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 CARHSP1Q9Y2V2 147 aaKnown RBP12.14□□□□□ -0.47
CHRD-212ENST00000470150 AP4M1O00189 453 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 COX5BP10606 129 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 ACKR3P25106 362 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 PNLIPRP3Q17RR3 467 aa12.14□□□□□ -0.47
CHRD-212ENST00000470150 LRP5LA4QPB2 252 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 CNIH1O95406 144 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 NKX2-1P43699 371 aaPredicted RBP12.13□□□□□ -0.47
CHRD-212ENST00000470150 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 POM121L2Q96KW2 1035 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 S1PR3Q99500 378 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 PECRQ9BY49 303 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 SLC35B3Q9H1N7 401 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 GSN-AS1Q9NRJ2 163 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 SLC2A8Q9NY64 477 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 PKD1L2Q7Z442 2459 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 HKR1P10072 659 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 SULT1A2P50226 295 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 C1QL2Q7Z5L3 287 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 RNF166Q96A37 237 aaPredicted RBP12.13□□□□□ -0.47
CHRD-212ENST00000470150 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 IGHV1-18A0A0C4DH31 117 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 hADV38S2A0JD32 116 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 SMAD7O15105 426 aaKnown RBP12.13□□□□□ -0.47
CHRD-212ENST00000470150 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
CHRD-212ENST00000470150 TMEM50BP56557 158 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 GNB1P62873 340 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 PTX4Q96A99 478 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
CHRD-212ENST00000470150 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
CHRD-212ENST00000470150 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 WNT9BO14905 357 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 PRDX2P32119 198 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 CEACAM6P40199 344 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 CYYR1Q96J86 154 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 B9A039 149 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 H0YL77 283 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 FGF16O43320 207 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 NPBWR2P48146 333 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 RPL31P62899 125 aaKnown RBP12.12□□□□□ -0.47
CHRD-212ENST00000470150 GPHA2Q96T91 129 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 ZNF665Q9H7R5 613 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 KIAA2026Q5HYC2 2103 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 PQLC2LA1A4F0 135 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 SNCAP37840 140 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHRD-212ENST00000470150 HABP2Q14520 560 aaPredicted RBP12.12□□□□□ -0.47
CHRD-212ENST00000470150 FAM166AQ6J272 317 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 BTNL3Q6UXE8 466 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 AQP10Q96PS8 301 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 SH3BGRL3Q9H299 93 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 RIMS4Q9H426 269 aaPredicted RBP12.12□□□□□ -0.47
CHRD-212ENST00000470150 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 ZNF319Q9P2F9 582 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 WIPI2Q9Y4P8 454 aa12.12□□□□□ -0.47
CHRD-212ENST00000470150 ZNF106Q9H2Y7 1883 aaKnown RBP12.12□□□□□ -0.47
CHRD-212ENST00000470150 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 APOA2P02652 100 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 CTXN2P0C2S0 81 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 PPP1CCP36873 323 aaKnown RBP12.11□□□□□ -0.47
CHRD-212ENST00000470150 TLE4Q04727 773 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 LRP11Q86VZ4 500 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 TMEM230Q96A57 120 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 SPIN2AQ99865 258 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 SPIN2BQ9BPZ2 258 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 TMPRSS5Q9H3S3 457 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 FAM215AQ9Y5M1 114 aa12.11□□□□□ -0.47
CHRD-212ENST00000470150 A0A1W2PPE3 182 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms