RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TOLLIPQ9H0E2 274 aa15.04■□□□□ -0
SMC4-211ENST00000469858 GNG12Q9UBI6 72 aa15.04■□□□□ -0
SMC4-211ENST00000469858 YLPM1P49750 1951 aaKnown RBP15.04■□□□□ -0
SMC4-211ENST00000469858 H0Y980 276 aa15.04■□□□□ -0
SMC4-211ENST00000469858 LYPD2Q6UXB3 125 aa15.04■□□□□ -0
SMC4-211ENST00000469858 ZNF546Q86UE3 836 aa15.04■□□□□ -0
SMC4-211ENST00000469858 ZNF695Q8IW36 515 aa15.04■□□□□ -0
SMC4-211ENST00000469858 ZNF645Q8N7E2 425 aa15.04■□□□□ -0
SMC4-211ENST00000469858 THAP6Q8TBB0 222 aa15.04■□□□□ -0
SMC4-211ENST00000469858 RALYQ9UKM9 306 aaKnown RBP15.04■□□□□ -0
SMC4-211ENST00000469858 PAIP2BQ9ULR5 123 aaKnown RBP15.04■□□□□ -0
SMC4-211ENST00000469858 HRNRQ86YZ3 2850 aaPredicted RBP15.03■□□□□ -0
SMC4-211ENST00000469858 RGS13O14921 159 aa15.03■□□□□ -0
SMC4-211ENST00000469858 COL8A2P25067 703 aa15.03■□□□□ -0
SMC4-211ENST00000469858 UCP1P25874 307 aa15.03■□□□□ -0
SMC4-211ENST00000469858 C11orf71Q6IPW1 123 aa15.03■□□□□ -0
SMC4-211ENST00000469858 TCF23Q7RTU1 214 aa15.03■□□□□ -0
SMC4-211ENST00000469858 RAB1BQ9H0U4 201 aa15.03■□□□□ -0
SMC4-211ENST00000469858 MBD2Q9UBB5 411 aa15.03■□□□□ -0
SMC4-211ENST00000469858 JPT1Q9UK76 154 aa15.03■□□□□ -0
SMC4-211ENST00000469858 LRBAP50851 2863 aa15.03■□□□□ -0
SMC4-211ENST00000469858 ARID1AO14497 2285 aa15.03■□□□□ -0
SMC4-211ENST00000469858 CGB3P0DN86 165 aa15.02■□□□□ -0
SMC4-211ENST00000469858 CGB7P0DN87 165 aa15.02■□□□□ -0
SMC4-211ENST00000469858 SLC25A4P12235 298 aa15.02■□□□□ -0
SMC4-211ENST00000469858 AP2S1P53680 142 aaPredicted RBP15.02■□□□□ -0
SMC4-211ENST00000469858 C17orf58Q2M2W7 97 aa15.02■□□□□ -0
SMC4-211ENST00000469858 TMEM56Q96MV1 263 aa15.02■□□□□ -0
SMC4-211ENST00000469858 MFFQ9GZY8 342 aa15.02■□□□□ -0
SMC4-211ENST00000469858 TMEM56-RWDD3S4R434 201 aa15.02■□□□□ -0
SMC4-211ENST00000469858 F2RL2O00254 374 aa15.02□□□□□ -0.01
SMC4-211ENST00000469858 ST8SIA5O15466 376 aa15.02□□□□□ -0.01
SMC4-211ENST00000469858 ZNF16P17020 682 aaPredicted RBP15.02□□□□□ -0.01
SMC4-211ENST00000469858 IGFBP2P18065 325 aa15.02□□□□□ -0.01
SMC4-211ENST00000469858 RAB32Q13637 225 aa15.02□□□□□ -0.01
SMC4-211ENST00000469858 PSG11Q9UQ72 335 aa15.02□□□□□ -0.01
SMC4-211ENST00000469858 KBTBD11-OT1A0A1B0GTJ5 212 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 TNFRSF13BO14836 293 aaPredicted RBP15.01□□□□□ -0.01
SMC4-211ENST00000469858 FCN3O75636 299 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 CDS2O95674 445 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 DANCRP0C864 163 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 RPA2P15927 270 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 LOXL3P58215 753 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 S100A10P60903 97 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 IL15RAQ13261 267 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 MORN2Q502X0 79 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 TMEM65Q6PI78 240 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 SELENOHQ8IZQ5 122 aaKnown RBP15.01□□□□□ -0.01
SMC4-211ENST00000469858 ABHD14BQ96IU4 210 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 RAB9BQ9NP90 201 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 CTSZQ9UBR2 303 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 CLN8Q9UBY8 286 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 TMED3Q9Y3Q3 217 aa15.01□□□□□ -0.01
SMC4-211ENST00000469858 NDUFB3O43676 98 aa15□□□□□ -0.01
SMC4-211ENST00000469858 SNAPC5O75971 98 aa15□□□□□ -0.01
SMC4-211ENST00000469858 LY6HO94772 140 aa15□□□□□ -0.01
SMC4-211ENST00000469858 IGHV3-7P01780 117 aa15□□□□□ -0.01
SMC4-211ENST00000469858 OPCMLQ14982 345 aa15□□□□□ -0.01
SMC4-211ENST00000469858 LRRC10Q5BKY1 277 aa15□□□□□ -0.01
SMC4-211ENST00000469858 FOXRED2Q8IWF2 684 aa15□□□□□ -0.01
SMC4-211ENST00000469858 ZNF843Q8N446 348 aa15□□□□□ -0.01
SMC4-211ENST00000469858 EDARADDQ8WWZ3 215 aa15□□□□□ -0.01
SMC4-211ENST00000469858 RBPMSQ93062 196 aaKnown RBP15□□□□□ -0.01
SMC4-211ENST00000469858 C5orf30Q96GV9 206 aa15□□□□□ -0.01
SMC4-211ENST00000469858 UBTD1Q9HAC8 227 aa15□□□□□ -0.01
SMC4-211ENST00000469858 TNFSF18Q9UNG2 199 aa15□□□□□ -0.01
SMC4-211ENST00000469858 LAMP3Q9UQV4 416 aa15□□□□□ -0.01
SMC4-211ENST00000469858 hADV38S2A0JD32 116 aa15□□□□□ -0.01
SMC4-211ENST00000469858 H0YIZ8 118 aa15□□□□□ -0.01
SMC4-211ENST00000469858 YPEL1O60688 119 aa15□□□□□ -0.01
SMC4-211ENST00000469858 SERPINE2P07093 398 aa15□□□□□ -0.01
SMC4-211ENST00000469858 C4BPBP20851 252 aa15□□□□□ -0.01
SMC4-211ENST00000469858 S100A11P31949 105 aa15□□□□□ -0.01
SMC4-211ENST00000469858 TMUB2Q71RG4 321 aa15□□□□□ -0.01
SMC4-211ENST00000469858 DTX2Q86UW9 622 aa15□□□□□ -0.01
SMC4-211ENST00000469858 H1FXQ92522 213 aaKnown RBP15□□□□□ -0.01
SMC4-211ENST00000469858 DCUN1D4Q92564 292 aa15□□□□□ -0.01
SMC4-211ENST00000469858 YPEL2Q96QA6 119 aa15□□□□□ -0.01
SMC4-211ENST00000469858 RNF126Q9BV68 326 aa15□□□□□ -0.01
SMC4-211ENST00000469858 ARL6Q9H0F7 186 aa15□□□□□ -0.01
SMC4-211ENST00000469858 HEXA-AS1Q9H8Q6 139 aa15□□□□□ -0.01
SMC4-211ENST00000469858 C19orf12Q9NSK7 152 aa15□□□□□ -0.01
SMC4-211ENST00000469858 LIN7CQ9NUP9 197 aaKnown RBP15□□□□□ -0.01
SMC4-211ENST00000469858 ZFYVE26Q68DK2 2539 aa15□□□□□ -0.01
SMC4-211ENST00000469858 ZNF729A6NN14 1252 aaPredicted RBP14.99□□□□□ -0.01
SMC4-211ENST00000469858 DVL1O14640 695 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 B3GALNT1O75752 331 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 SCGB1D2O95969 90 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 WNT2P09544 360 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 RPL31P62899 125 aaKnown RBP14.99□□□□□ -0.01
SMC4-211ENST00000469858 BTNL3Q6UXE8 466 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 ZBTB34Q8NCN2 500 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 CORO2AQ92828 525 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 AGMATQ9BSE5 352 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 OR5AC2Q9NZP5 309 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 KAAG1Q9UBP8 84 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 LINC00312Q9Y6C7 94 aa14.99□□□□□ -0.01
SMC4-211ENST00000469858 KCNAB3O43448 404 aa14.98□□□□□ -0.01
SMC4-211ENST00000469858 NDUFA2O43678 99 aa14.98□□□□□ -0.01
SMC4-211ENST00000469858 PET100P0DJ07 73 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms