RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 BEST4Q8NFU0 473 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 FCAMRQ8WWV6 532 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 AJUBAQ96IF1 538 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 IFT46Q9NQC8 304 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 PIPOXQ9P0Z9 390 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF230Q9UIE0 474 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 ANAPC10Q9UM13 185 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 GAB2Q9UQC2 676 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 SETD2Q9BYW2 2564 aaPredicted RBP10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 FABP12A6NFH5 140 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 RAB29O14966 203 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 RBBP9O75884 186 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 SLC22A5O76082 557 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 TBPP20226 339 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 RCVRNP35243 200 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 IER3P46695 156 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 BAMBIQ13145 260 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 CT45A1Q5HYN5 189 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 TPTE2P1Q5T6R2 138 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 LIAT1Q6ZQX7 453 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 IZUMO1Q8IYV9 350 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 OR5AP2Q8NGF4 316 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 OR52L2PQ8NGH6 319 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 CT45A3Q8NHU0 189 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 C22orf15Q8WYQ4 148 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 RPEQ96AT9 228 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 SOSTQ9BQB4 213 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 GINS4Q9BRT9 223 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 ABHD14AQ9BUJ0 271 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 NECAP2Q9NVZ3 263 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 TAS2R8Q9NYW2 309 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNRD1Q9P1U0 126 aa10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 ELF5Q9UKW6 265 aaPredicted RBP10.23□□□□□ -0.77
SPTLC1-204ENST00000469778 IGKV1-6A0A0C4DH72 117 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 A0A1W2PRD5 423 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 A0A1W2PRF3 423 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 A0A1W2PRM7 423 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 TRIM77I1YAP6 450 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 LANCL1O43813 399 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 PPP1CCP36873 323 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ETV6P41212 452 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 OR3A3P47888 321 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF134P52741 427 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ARPC4P59998 168 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF816Q0VGE8 651 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 SSX2Q16385 188 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 LRRC75BQ2VPJ9 315 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 PLA1AQ53H76 456 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ACTBL2Q562R1 376 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 SPANXN2Q5MJ10 180 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 FOXB2Q5VYV0 432 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 THNSL2Q86YJ6 484 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 SNX29P2Q8IUI4 249 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 OR10V1Q8NGI7 309 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ST6GALNAC6Q969X2 333 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ABHD1Q96SE0 405 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 S1PR3Q99500 378 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 RAB18Q9NP72 206 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 ABCB10Q9NRK6 738 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 RDH8Q9NYR8 311 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 MTFP1Q9UDX5 166 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 PITPNC1Q9UKF7 332 aa10.22□□□□□ -0.77
SPTLC1-204ENST00000469778 IGHV3-43A0A0B4J1X8 118 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 BET1O15155 118 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 GSTZ1O43708 216 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 FAM106CPP0CH98 169 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 IGHV3-43DP0DP04 118 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 GNG10P50151 68 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 PRB3Q04118 309 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 IL18Q14116 193 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 HERPUD1Q15011 391 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 IGSF11Q5DX21 431 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 DHRS11Q6UWP2 260 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 LHFPL4Q7Z7J7 247 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 H1FOOQ8IZA3 346 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 UBALD1Q8TB05 177 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 GCDHQ92947 438 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 LEAP2Q969E1 77 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 BORCS5Q969J3 196 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 TOMM40LQ969M1 308 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 CYYR1Q96J86 154 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF48Q96MX3 618 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 SSX3Q99909 188 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 AGMATQ9BSE5 352 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 C11orf54Q9H0W9 315 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF221Q9UK13 617 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 OR2W1Q9Y3N9 320 aa10.21□□□□□ -0.77
SPTLC1-204ENST00000469778 IGKV1D-8A0A087WSZ0 117 aa10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 FAM172BPA6NC97 362 aa10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 RNASE1P07998 156 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 OR5H8P0DN80 308 aa10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 TAGLNQ01995 201 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 HABP2Q14520 560 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 GNMTQ14749 295 aa10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 CDK10Q15131 360 aa10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 SLC9A3R2Q15599 337 aa10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 MSMO1Q15800 293 aa10.2□□□□□ -0.78
SPTLC1-204ENST00000469778 SVEP1Q4LDE5 3571 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms