RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 M0QZ24 198 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 MLNRO43193 412 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 GYPAP02724 150 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 STAG3L2P0CL84 134 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF728P0DKX0 622 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 PSG1P11464 419 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 PMCHP20382 165 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 GZMHP20718 246 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 KITLGP21583 273 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 PTGER4P35408 488 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 TIMP3P35625 211 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF93P35789 620 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 HINT1P49773 126 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 GNG4P50150 75 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ASCL1P50553 236 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ATP5IP56385 69 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 CKS1BP61024 79 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 HIST1H1AQ02539 215 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 DMWDQ09019 674 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 TAF10Q12962 218 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 SLAQ13239 276 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 GPM6BQ13491 265 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ZIC1Q15915 447 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF141Q15928 474 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 SRSF7Q16629 238 aaKnown RBP eCLIP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 HLA-DRB5Q30154 266 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 CD300EQ496F6 205 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 C1QL3Q5VWW1 255 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 LCN10Q6JVE6 187 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 UNQ5815/PRO19632Q6UWF5 114 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 GLB1LQ6UWU2 654 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 MRPL21Q7Z2W9 205 aaKnown RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 CMTM8Q8IZV2 173 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 GVQW1Q8N7I0 195 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ST6GALNAC3Q8NDV1 305 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 STXBP6Q8NFX7 210 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 RTN4IP1Q8WWV3 396 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 KLK6Q92876 244 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF681Q96N22 645 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 TSSK2Q96PF2 358 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 KLHDC3Q9BQ90 382 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ABHD14AQ9BUJ0 271 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 TM2D1Q9BX74 207 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ULBP2Q9BZM5 246 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 OR10A2Q9H208 303 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 C11orf1Q9H5F2 150 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 SLC2A4RGQ9NR83 387 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 TRAPPC2LQ9UL33 140 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 RCL1Q9Y2P8 373 aaKnown RBP4.16□□□□□ -1.74
SF3B1-207ENST00000468925 A0A087WWL8 130 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 TRAV38-1A0A0B4J264 116 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 A0A0G2JMM0 328 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 CTXND1A0A1B0GTU2 59 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1B0GVT2 93 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 LOC107986453A0A1B0GWG9 222 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1W2PNV4 684 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1W2PPB8 328 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 PSMB11A5LHX3 300 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 NPIPB13A6NJU9 1138 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 KIR3DP1A8MWS1 328 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 NPIPB4C9JG80 1138 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF878C9JN71 531 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 H0YJW9 148 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 KLRC4-KLRK1H3BQV0 150 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 H3BRM9 83 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 TAX1BP3O14907 124 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF324O75467 553 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RAD51DO75771 328 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RHBDL1O75783 438 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 TRAPPC6AO75865 159 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 SERF1AO75920 110 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 NKX2-2O95096 273 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 HAND1O96004 215 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 MT-ATP6P00846 226 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 FSHBP01225 129 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 HLA-DQA1P01909 254 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 HBZP02008 142 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 WNT2P09544 360 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 OR5AL1P0C617 328 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF20P17024 532 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 VDAC1P21796 283 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 F2RP25116 425 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 GRPRP30550 384 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 CORO1AP31146 461 aaKnown RBP4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RRADP55042 308 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 CTXN1P60606 82 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 KRTDAPP60985 99 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RPS24P62847 133 aaKnown RBP4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RPL24P83731 157 aaKnown RBP4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RUNX1Q01196 453 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 UNC119Q13432 240 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 MEP1BQ16820 701 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF658BQ4V348 819 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-207ENST00000468925 DCAF12Q5T6F0 453 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 WBP2NLQ6ICG8 309 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 DGAT2L7PQ6IED9 249 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 SLC25A34Q6PIV7 304 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM256Q8N2U0 113 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 LINC00482Q8N8I6 264 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms