RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CYGBQ8WWM9 190 aa-0.54□□□□□ -2.5
SSB-208ENST00000468600 PRSS27Q9BQR3 290 aa-0.54□□□□□ -2.5
SSB-208ENST00000468600 VCX3BQ9H321 246 aa-0.54□□□□□ -2.5
SSB-208ENST00000468600 C8orf33Q9H7E9 229 aaPredicted RBP-0.54□□□□□ -2.5
SSB-208ENST00000468600 PTPRBP23467 1997 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 WRBO00258 174 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 CCL3P10147 92 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 RPL27AP46776 148 aaKnown RBP-0.55□□□□□ -2.5
SSB-208ENST00000468600 EMX1Q04741 257 aaPredicted RBP-0.55□□□□□ -2.5
SSB-208ENST00000468600 RAB11BQ15907 218 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 DYNAPQ8N1N2 210 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 ACBD6Q9BR61 282 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 SNURFQ9Y675 71 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 ZNF462Q96JM2 2506 aa-0.55□□□□□ -2.5
SSB-208ENST00000468600 AQRO60306 1485 aaKnown RBP eCLIP-0.55□□□□□ -2.51e-7■■□□□ 12.1
SSB-208ENST00000468600 A0A1W2PQD3 144 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 B4DEV8 164 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 FGF4P08620 206 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 PSMA1P25786 263 aaKnown RBP-0.56□□□□□ -2.5
SSB-208ENST00000468600 ATP6V0CP27449 155 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 ARR3P36575 388 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 FGF12P61328 243 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 MAPK14Q16539 360 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 MOGQ16653 247 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 LGALS9BQ3B8N2 356 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 SPATA31B1PQ5VZV4 182 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 LAMTOR1Q6IAA8 161 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.56□□□□□ -2.5
SSB-208ENST00000468600 DGAT2L6Q6ZPD8 337 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 Q8N6K4 173 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 ANGPTL6Q8NI99 470 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 UTP23Q9BRU9 249 aaKnown RBP-0.56□□□□□ -2.5
SSB-208ENST00000468600 DOHHQ9BU89 302 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 MYO15BQ96JP2 1530 aa-0.56□□□□□ -2.5
SSB-208ENST00000468600 PHYHO14832 338 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 SERPINA7P05543 415 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 PPP1CCP36873 323 aaKnown RBP-0.57□□□□□ -2.5
SSB-208ENST00000468600 GABARAPL2P60520 117 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 PRDX1Q06830 199 aaKnown RBP-0.57□□□□□ -2.5
SSB-208ENST00000468600 C7orf65Q6ZTY9 151 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 FAM19A1Q7Z5A9 133 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 ZBTB8OSQ8IWT0 167 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 SPICQ8N5J4 248 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 CERS2Q96G23 380 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 HBEGFQ99075 208 aa-0.57□□□□□ -2.5
SSB-208ENST00000468600 WDR90Q96KV7 1748 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 TRAV8-2A0A0B4J237 113 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 PSMD11O00231 422 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 SPNP16150 400 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 SRSF6Q13247 344 aaKnown RBP-0.58□□□□□ -2.5
SSB-208ENST00000468600 ELOBQ15370 118 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 GUSBP1Q15486 140 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 NDUFAF6Q330K2 333 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 RESP18Q5W5W9 173 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 DCXRQ7Z4W1 244 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 OR2AG1Q9H205 316 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 HHLA2Q9UM44 414 aa-0.58□□□□□ -2.5
SSB-208ENST00000468600 NCOR2Q9Y618 2525 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 TVP23AA6NH52 213 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 C8orf87E5RJ46 101 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 E7EWF7 191 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 SLC17A3O00476 420 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 BHLHE40O14503 412 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 SNX4O95219 450 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 IGHV1-69P01742 117 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 BPGMP07738 259 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 ACTR1BP42025 376 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 SPAG1Q07617 926 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 LRRC74AQ0VAA2 488 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 KTN1-AS1Q86SY8 53 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 CNEP1R1Q8N9A8 125 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 ZNF396Q96N95 335 aaPredicted RBP-0.59□□□□□ -2.5
SSB-208ENST00000468600 METTL17Q9H7H0 456 aaPredicted RBP-0.59□□□□□ -2.5
SSB-208ENST00000468600 VAPAQ9P0L0 249 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 GLI3P10071 1580 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 MUC12Q9UKN1 5478 aa-0.59□□□□□ -2.5
SSB-208ENST00000468600 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.59□□□□□ -2.5
SSB-208ENST00000468600 HRNRQ86YZ3 2850 aaPredicted RBP-0.6□□□□□ -2.51
SSB-208ENST00000468600 CTAGE15A4D2H0 777 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 LINC00862A6NCI5 91 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 CCDC169A6NNP5 214 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 OR11H12B2RN74 326 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 CASQ2O14958 399 aaPredicted RBP-0.6□□□□□ -2.51
SSB-208ENST00000468600 OPRM1P35372 400 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 SERPINB10P48595 397 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 DNASE1L1P49184 302 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 CIRBPQ14011 172 aaKnown RBP-0.6□□□□□ -2.51
SSB-208ENST00000468600 PAFAH1B3Q15102 231 aaKnown RBP-0.6□□□□□ -2.51
SSB-208ENST00000468600 ARHGAP11BQ3KRB8 267 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 FAM183BPQ6ZVS7 135 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 CTAGE6Q86UF2 777 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 OR11H2Q8NH07 326 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 CLDND2Q8NHS1 167 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 SLC7A6Q92536 515 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 GTSF1LQ9H1H1 148 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 SDHAF2Q9NX18 166 aa-0.6□□□□□ -2.51
SSB-208ENST00000468600 PTPRZ1P23471 2315 aaPredicted RBP-0.6□□□□□ -2.51
SSB-208ENST00000468600 EPPINO95925 133 aa-0.61□□□□□ -2.51
SSB-208ENST00000468600 CRYBB3P26998 211 aa-0.61□□□□□ -2.51
SSB-208ENST00000468600 XRCC4Q13426 336 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms