RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TM2D1Q9BX74 207 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 SH2D2AQ9NP31 389 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 RCC2Q9P258 522 aaKnown RBP11.83□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF835Q9Y2P0 537 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 LIPGQ9Y5X9 500 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 LRRC3CA6NJW4 275 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 CXCL2P19875 107 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 CNN1P51911 297 aaKnown RBP11.83□□□□□ -0.52
BRAT1-203ENST00000467558 RTP5Q14D33 572 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 MED19A0JLT2 244 aaPredicted RBP11.83□□□□□ -0.52
BRAT1-203ENST00000467558 HPRT1P00492 218 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 FBP1P09467 338 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 BRS3P32247 399 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 OR2T6Q8NHC8 308 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 UBTD1Q9HAC8 227 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 CISD1Q9NZ45 108 aaKnown RBP11.83□□□□□ -0.52
BRAT1-203ENST00000467558 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 K7N7A8 449 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 IFNL4K9M1U5 179 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 GYPAP02724 150 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 RBP4P02753 201 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 ACSM6Q6P461 480 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 TNXAQ16473 311 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 RSPO4Q2I0M5 234 aaPredicted RBP11.82□□□□□ -0.52
BRAT1-203ENST00000467558 ASPHD2Q6ICH7 369 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 NECAP1Q8NC96 275 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 CHRDL1Q9BU40 450 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 NDUFA2O43678 99 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 MMP9P14780 707 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 UCP3P55916 312 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 LILRB1Q8NHL6 650 aaPredicted RBP11.82□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF714Q96N38 554 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 GINS3Q9BRX5 216 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 ELOVL5Q9NYP7 299 aa11.82□□□□□ -0.52
BRAT1-203ENST00000467558 SPTBN1Q01082 2364 aaKnown RBP11.82□□□□□ -0.52
BRAT1-203ENST00000467558 SPTAN1Q13813 2472 aaKnown RBP11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF737O75373 536 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 CECR9P0C854 216 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 SSX2Q16385 188 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 PLAC9Q5JTB6 97 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 BVESQ8NE79 360 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ABHD17AQ96GS6 310 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 C1RLQ9NZP8 487 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 MMP24Q9Y5R2 645 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF385CQ66K41 422 aaPredicted RBP11.81□□□□□ -0.52
BRAT1-203ENST00000467558 OR1L1Q8NH94 360 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ABHD14BQ96IU4 210 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 NDFIP1Q9BT67 221 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF318Q5VUA4 2279 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 RBFOX3A6NFN3 312 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 GAPDHP04406 335 aaKnown RBP11.81□□□□□ -0.52
BRAT1-203ENST00000467558 H2BFSP57053 126 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ANKRD55Q3KP44 614 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ACSF3Q4G176 576 aaPredicted RBP11.81□□□□□ -0.52
BRAT1-203ENST00000467558 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 FBLN5Q9UBX5 448 aa11.81□□□□□ -0.52
BRAT1-203ENST00000467558 A0A1W2PPQ1 181 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 TMEM218A2RU14 115 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 LEUTXA8MZ59 168 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 SMPD2O60906 423 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 PGLYRP1O75594 196 aaPredicted RBP11.8□□□□□ -0.52
BRAT1-203ENST00000467558 HNF1AP20823 631 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 STPG2Q8N412 459 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 TMEM171Q8WVE6 324 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 OR5AC2Q9NZP5 309 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 OR1A1Q9P1Q5 309 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 A0A1W2PRD5 423 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 A0A1W2PRF3 423 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 A0A1W2PRM7 423 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 TSTD3H0UI37 97 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 DEDDO75618 318 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 OR2A4O95047 310 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 NPY1RP25929 384 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 CEBPDP49716 269 aaPredicted RBP11.8□□□□□ -0.52
BRAT1-203ENST00000467558 H3F3AP84243 136 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 TMEM252Q8N6L7 170 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 OR1L8Q8NGR8 309 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 OR2A7Q96R45 310 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 KLHDC3Q9BQ90 382 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 RNF115Q9Y4L5 304 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 A0A1W2PPE3 182 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 CDRT15L2A8MXV6 281 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 DAOP14920 347 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 GPR6P46095 362 aaPredicted RBP11.8□□□□□ -0.52
BRAT1-203ENST00000467558 KLRB1Q12918 225 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 CALHM1Q8IU99 346 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF645Q8N7E2 425 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 OR1L4Q8NGR5 311 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 PINLYPA6NC86 204 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 CCL1P22362 96 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 TMEM241Q24JQ0 296 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 Q56UQ5 140 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 NSUN5P2Q63ZY6 315 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 AP1S3Q96PC3 154 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 PARP11Q9NR21 331 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms